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JMJD4 jumonji domain containing 4 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105597679, updated on 13-Mar-2024

Summary

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Gene symbol
JMJD4
Gene description
jumonji domain containing 4
See related
Ensembl:ENSCATG00000030697
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See JMJD4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002148.1 (258946..263276, complement)

NW_012002148.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 678 Neighboring gene protein FAM133B pseudogene Neighboring gene uncharacterized LOC105597675 Neighboring gene synaptosome associated protein 47 Neighboring gene serine protease 38 Neighboring gene Wnt family member 9A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012002148.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H4R3 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational termination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
jmjC domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012002148.1 Reference Caty_1.0

    Range
    258946..263276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012086169.1 → XP_011941559.1  jmjC domain-containing protein 4 isoform X2

    See identical proteins and their annotated locations for XP_011941559.1

    UniProtKB/TrEMBL
    A0A2K5LJH7
    Related
    ENSCATP00000013114.1, ENSCATT00000037249.1
    Conserved Domains (1) summary
    cl21464
    Location:87 → 334
    cupin_like; Conserved domain found in cupin and related proteins

  2. XM_012086168.1 → XP_011941558.1  jmjC domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_011941558.1

    UniProtKB/TrEMBL
    A0A2K5LJH7, A0A2K5LJI7
    Related
    ENSCATP00000013111.1, ENSCATT00000037246.1
    Conserved Domains (1) summary
    cl21464
    Location:87 → 334
    cupin_like; Conserved domain found in cupin and related proteins
Nucleotide Protein
Heading Accession and Version

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