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RAVER2 ribonucleoprotein, PTB binding 2 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105595925, updated on 13-Mar-2024

Summary

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Gene symbol
RAVER2
Gene description
ribonucleoprotein, PTB binding 2
See related
Ensembl:ENSCATG00000040658
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See RAVER2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001850.1 (14634422..14720651, complement)

NW_012001850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105595921 Neighboring gene 28S ribosomal protein S21, mitochondrial pseudogene Neighboring gene uncharacterized LOC105595920 Neighboring gene solute carrier family 2, facilitated glucose transporter member 3 pseudogene Neighboring gene Janus kinase 1 Neighboring gene 40S ribosomal protein S26-like Neighboring gene cache domain containing 1 Neighboring gene ubiquitin conjugating enzyme E2 U

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001850.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonucleoprotein PTB-binding 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001850.1 Reference Caty_1.0

    Range
    14634422..14720651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012082364.1 → XP_011937754.1  ribonucleoprotein PTB-binding 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5NDT9, A0A2K5NE71
    Related
    ENSCATP00000035619.1, ENSCATT00000059903.1
    Conserved Domains (3) summary
    cd12664
    Location:72 → 141
    RRM1_RAVER2; RNA recognition motif 1 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cd12666
    Location:145 → 221
    RRM2_RAVER2; RNA recognition motif 2 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cd12668
    Location:231 → 328
    RRM3_RAVER2; RNA recognition motif 3 found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

  2. XM_012082366.1 → XP_011937756.1  ribonucleoprotein PTB-binding 2 isoform X3

    See identical proteins and their annotated locations for XP_011937756.1

    UniProtKB/TrEMBL
    A0A2K5NE71
    Conserved Domains (3) summary
    cd12666
    Location:22 → 98
    RRM2_RAVER2; RNA recognition motif 2 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cd12668
    Location:108 → 205
    RRM3_RAVER2; RNA recognition motif 3 found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cl17169
    Location:1 → 18
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_012082365.1 → XP_011937755.1  ribonucleoprotein PTB-binding 2 isoform X2

    UniProtKB/TrEMBL
    A0A2K5NE71
    Conserved Domains (3) summary
    cd12666
    Location:51 → 127
    RRM2_RAVER2; RNA recognition motif 2 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cd12668
    Location:137 → 234
    RRM3_RAVER2; RNA recognition motif 3 found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cl17169
    Location:14 → 47
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_012082367.1 → XP_011937757.1  ribonucleoprotein PTB-binding 2 isoform X3

    See identical proteins and their annotated locations for XP_011937757.1

    UniProtKB/TrEMBL
    A0A2K5NE71
    Conserved Domains (3) summary
    cd12666
    Location:22 → 98
    RRM2_RAVER2; RNA recognition motif 2 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cd12668
    Location:108 → 205
    RRM3_RAVER2; RNA recognition motif 3 found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    cl17169
    Location:1 → 18
    RRM_SF; RNA recognition motif (RRM) superfamily

RNA

  1. XR_001018430.1 RNA Sequence

  2. XR_001018431.1 RNA Sequence

Nucleotide Protein
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