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RNF170 ring finger protein 170 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105595749, updated on 13-Mar-2024

Summary

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Gene symbol
RNF170
Gene description
ring finger protein 170
See related
Ensembl:ENSCATG00000037123
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001817.1 (860727..911405)

NW_012001817.1Genomic Context describing neighboring genes Neighboring gene farnesyltransferase, CAAX box, subunit alpha Neighboring gene hook microtubule tethering protein 3 Neighboring gene uncharacterized LOC105595748 Neighboring gene THAP domain containing 1 Neighboring gene cholinergic receptor nicotinic alpha 6 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001817.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF170

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001817.1 Reference Caty_1.0

    Range
    860727..911405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012081979.1 → XP_011937369.1  E3 ubiquitin-protein ligase RNF170 isoform X2

    See identical proteins and their annotated locations for XP_011937369.1

    UniProtKB/TrEMBL
    A0A2K5MQL5
    Related
    ENSCATP00000027494.1, ENSCATT00000051739.1
    Conserved Domains (2) summary
    cd16553
    Location:87 → 130
    RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
    pfam06803
    Location:203 → 239
    DUF1232; Protein of unknown function (DUF1232)

  2. XM_012081975.1 → XP_011937365.1  E3 ubiquitin-protein ligase RNF170 isoform X1

    See identical proteins and their annotated locations for XP_011937365.1

    Conserved Domains (1) summary
    cd00162
    Location:87 → 133
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  3. XM_012081980.1 → XP_011937370.1  E3 ubiquitin-protein ligase RNF170 isoform X3

    Conserved Domains (1) summary
    cd00162
    Location:87 → 133
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  4. XM_012081977.1 → XP_011937367.1  E3 ubiquitin-protein ligase RNF170 isoform X1

    See identical proteins and their annotated locations for XP_011937367.1

    Conserved Domains (1) summary
    cd00162
    Location:87 → 133
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  5. XM_012081978.1 → XP_011937368.1  E3 ubiquitin-protein ligase RNF170 isoform X1

    See identical proteins and their annotated locations for XP_011937368.1

    Conserved Domains (1) summary
    cd00162
    Location:87 → 133
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  6. XM_012081976.1 → XP_011937366.1  E3 ubiquitin-protein ligase RNF170 isoform X1

    See identical proteins and their annotated locations for XP_011937366.1

    Conserved Domains (1) summary
    cd00162
    Location:87 → 133
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
Nucleotide Protein
Heading Accession and Version

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