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TRAF4 TNF receptor associated factor 4 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105591534, updated on 13-Mar-2024

Summary

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Gene symbol
TRAF4
Gene description
TNF receptor associated factor 4
See related
Ensembl:ENSCATG00000045175
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See TRAF4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001273.1 (2072846..2079792)

NW_012001273.1Genomic Context describing neighboring genes Neighboring gene TLC domain containing 1 Neighboring gene NIMA related kinase 8 Neighboring gene family with sequence similarity 222 member B Neighboring gene Era like 12S mitochondrial rRNA chaperone 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001273.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of NF-kappaB-inducing kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TNF receptor-associated factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001273.1 Reference Caty_1.0

    Range
    2072846..2079792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012072428.1 → XP_011927818.1  TNF receptor-associated factor 4 isoform X1

    See identical proteins and their annotated locations for XP_011927818.1

    UniProtKB/TrEMBL
    A0A2K5P7A5, A0A2K5P7C4
    Related
    ENSCATP00000045601.1, ENSCATT00000070047.1
    Conserved Domains (4) summary
    PLN03086
    Location:113 → 211
    PLN03086; PRLI-interacting factor K; Provisional
    cd03781
    Location:308 → 463
    MATH_TRAF4; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF4 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF4, including the Drosophila protein DTRAF1. TRAF molecules serve as adapter ...
    pfam02176
    Location:210 → 269
    zf-TRAF; TRAF-type zinc finger
    cd16641
    Location:15 → 59
    mRING-HC-C3HC3D_TRAF4; Modified RING finger, HC subclass (C3HC3D-type), found in tumor necrosis factor (TNF) receptor-associated factor 4 (TRAF4) and similar proteins

  2. XM_012072429.1 → XP_011927819.1  TNF receptor-associated factor 4 isoform X2

    See identical proteins and their annotated locations for XP_011927819.1

    Conserved Domains (2) summary
    cd03781
    Location:190 → 345
    MATH_TRAF4; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF4 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF4, including the Drosophila protein DTRAF1. TRAF molecules serve as adapter ...
    pfam02176
    Location:92 → 151
    zf-TRAF; TRAF-type zinc finger
Nucleotide Protein
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