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ZNF41 zinc finger protein 41 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105590501, updated on 13-Mar-2024

Summary

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Gene symbol
ZNF41
Gene description
zinc finger protein 41
See related
Ensembl:ENSCATG00000037921
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001131.1 (1074317..1210870)

NW_012001131.1Genomic Context describing neighboring genes Neighboring gene synapsin I Neighboring gene TIMP metallopeptidase inhibitor 1 Neighboring gene A-Raf proto-oncogene, serine/threonine kinase Neighboring gene nucleophosmin-like Neighboring gene zinc finger protein 157

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001131.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001131.1 Reference Caty_1.0

    Range
    1074317..1210870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012070151.1 → XP_011925541.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925541.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain

  2. XM_012070149.1 → XP_011925539.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925539.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain

  3. XM_012070161.1 → XP_011925551.1  zinc finger protein 41 isoform X5

    See identical proteins and their annotated locations for XP_011925551.1

    Conserved Domains (3) summary
    COG5048
    Location:200 → 622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:477 → 497
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:490 → 514
    zf-H2C2_2; Zinc-finger double domain

  4. XM_012070162.1 → XP_011925552.1  zinc finger protein 41 isoform X5

    See identical proteins and their annotated locations for XP_011925552.1

    Conserved Domains (3) summary
    COG5048
    Location:200 → 622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:477 → 497
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:490 → 514
    zf-H2C2_2; Zinc-finger double domain

  5. XM_012070147.1 → XP_011925537.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925537.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain

  6. XM_012070160.1 → XP_011925550.1  zinc finger protein 41 isoform X4

    Conserved Domains (5) summary
    smart00349
    Location:37 → 82
    KRAB; krueppel associated box
    COG5048
    Location:282 → 704
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:559 → 579
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:572 → 596
    zf-H2C2_2; Zinc-finger double domain

  7. XM_012070155.1 → XP_011925545.1  zinc finger protein 41 isoform X2

    Related
    ENSCATP00000029373.1, ENSCATT00000053630.1
    Conserved Domains (5) summary
    smart00349
    Location:29 → 89
    KRAB; krueppel associated box
    COG5048
    Location:306 → 728
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:583 → 603
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:29 → 68
    KRAB; KRAB box
    pfam13465
    Location:596 → 620
    zf-H2C2_2; Zinc-finger double domain

  8. XM_012070152.1 → XP_011925542.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925542.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain

  9. XM_012070156.1 → XP_011925546.1  zinc finger protein 41 isoform X3

    See identical proteins and their annotated locations for XP_011925546.1

    UniProtKB/TrEMBL
    A0A2K5MWA4
    Related
    ENSCATP00000029363.1, ENSCATT00000053620.1
    Conserved Domains (5) summary
    smart00349
    Location:27 → 87
    KRAB; krueppel associated box
    COG5048
    Location:304 → 726
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:581 → 601
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:27 → 66
    KRAB; KRAB box
    pfam13465
    Location:594 → 618
    zf-H2C2_2; Zinc-finger double domain

  10. XM_012070159.1 → XP_011925549.1  zinc finger protein 41 isoform X3

    See identical proteins and their annotated locations for XP_011925549.1

    UniProtKB/TrEMBL
    A0A2K5MWA4
    Conserved Domains (5) summary
    smart00349
    Location:27 → 87
    KRAB; krueppel associated box
    COG5048
    Location:304 → 726
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:581 → 601
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:27 → 66
    KRAB; KRAB box
    pfam13465
    Location:594 → 618
    zf-H2C2_2; Zinc-finger double domain

  11. XM_012070154.1 → XP_011925544.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925544.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain

  12. XM_012070148.1 → XP_011925538.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925538.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain

  13. XM_012070150.1 → XP_011925540.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925540.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain

  14. XM_012070158.1 → XP_011925548.1  zinc finger protein 41 isoform X3

    See identical proteins and their annotated locations for XP_011925548.1

    UniProtKB/TrEMBL
    A0A2K5MWA4
    Related
    ENSCATP00000029365.1, ENSCATT00000053622.1
    Conserved Domains (5) summary
    smart00349
    Location:27 → 87
    KRAB; krueppel associated box
    COG5048
    Location:304 → 726
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:581 → 601
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:27 → 66
    KRAB; KRAB box
    pfam13465
    Location:594 → 618
    zf-H2C2_2; Zinc-finger double domain

  15. XM_012070153.1 → XP_011925543.1  zinc finger protein 41 isoform X1

    See identical proteins and their annotated locations for XP_011925543.1

    Conserved Domains (5) summary
    smart00349
    Location:37 → 97
    KRAB; krueppel associated box
    COG5048
    Location:314 → 736
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:591 → 611
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:37 → 76
    KRAB; KRAB box
    pfam13465
    Location:604 → 628
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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