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PLEKHF1 pleckstrin homology and FYVE domain containing 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105578098, updated on 13-Mar-2024

Summary

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Gene symbol
PLEKHF1
Gene description
pleckstrin homology and FYVE domain containing 1
See related
Ensembl:ENSCATG00000017587
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012005268.1 (805422..816223)

NW_012005268.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105578097 Neighboring gene POP4 homolog, ribonuclease P/MRP subunit Neighboring gene putative HTLV-1-related endogenous sequence Neighboring gene chromosome unknown open reading frame, human C19orf12 Neighboring gene cyclin E1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012005268.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family F member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012005268.1 Reference Caty_1.0

    Range
    805422..816223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012043376.1 → XP_011898766.1  pleckstrin homology domain-containing family F member 1

    See identical proteins and their annotated locations for XP_011898766.1

    UniProtKB/TrEMBL
    A0A2K5KX81
    Conserved Domains (3) summary
    cd01218
    Location:7 → 129
    PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
    cd15754
    Location:148 → 211
    FYVE_PKHF1; FYVE domain found in protein containing both PH and FYVE domains 1 (phafin-1) and similar proteins
    pfam00169
    Location:39 → 131
    PH; PH domain

  2. XM_012043377.1 → XP_011898767.1  pleckstrin homology domain-containing family F member 1

    See identical proteins and their annotated locations for XP_011898767.1

    UniProtKB/TrEMBL
    A0A2K5KX81
    Related
    ENSCATP00000005324.1, ENSCATT00000020132.1
    Conserved Domains (3) summary
    cd01218
    Location:7 → 129
    PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
    cd15754
    Location:148 → 211
    FYVE_PKHF1; FYVE domain found in protein containing both PH and FYVE domains 1 (phafin-1) and similar proteins
    pfam00169
    Location:39 → 131
    PH; PH domain
Nucleotide Protein
Heading Accession and Version

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