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FAM13A family with sequence similarity 13 member A [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105576739, updated on 13-Mar-2024

Summary

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Gene symbol
FAM13A
Gene description
family with sequence similarity 13 member A
See related
Ensembl:ENSCATG00000040672
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012004825.1 (3927243..4307329)

NW_012004825.1Genomic Context describing neighboring genes Neighboring gene GPRIN family member 3 Neighboring gene 40S ribosomal protein S4, Y Neighboring gene tigger transposable element derived 2 Neighboring gene ubiquitin-60S ribosomal protein L40 pseudogene Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 3 Neighboring gene nucleosome assembly protein 1 like 5 Neighboring gene leukocyte surface antigen CD53 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012004825.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM13A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012004825.1 Reference Caty_1.0

    Range
    3927243..4307329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012040091.1 → XP_011895481.1  protein FAM13A isoform X4

    UniProtKB/TrEMBL
    A0A2K5NDQ1
    Conserved Domains (3) summary
    cd04393
    Location:19 → 206
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
    pfam12361
    Location:329 → 531
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:630 → 832
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  2. XM_012040088.1 → XP_011895478.1  protein FAM13A isoform X1

    See identical proteins and their annotated locations for XP_011895478.1

    UniProtKB/TrEMBL
    A0A2K5NDS4, A0A2K5NDS8
    Conserved Domains (3) summary
    cd04393
    Location:39 → 226
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
    pfam12361
    Location:349 → 551
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:650 → 852
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  3. XM_012040097.1 → XP_011895487.1  protein FAM13A isoform X9

    UniProtKB/TrEMBL
    A0A2K5NDQ1
    Conserved Domains (3) summary
    pfam12361
    Location:280 → 482
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:581 → 783
    HMMR_N; Hyaluronan mediated motility receptor N-terminal
    cl02570
    Location:2 → 157
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...

  4. XM_012040093.1 → XP_011895483.1  protein FAM13A isoform X5

    UniProtKB/TrEMBL
    A0A2K5NDS8, A0A2K5NEA2
    Related
    ENSCATP00000035650.1, ENSCATT00000059934.1
    Conserved Domains (3) summary
    cd04393
    Location:39 → 226
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
    pfam12361
    Location:349 → 551
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:650 → 852
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  5. XM_012040095.1 → XP_011895485.1  protein FAM13A isoform X7

    UniProtKB/TrEMBL
    A0A2K5NDQ1
    Related
    ENSCATP00000035653.1, ENSCATT00000059937.1
    Conserved Domains (3) summary
    pfam12361
    Location:306 → 508
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:607 → 809
    HMMR_N; Hyaluronan mediated motility receptor N-terminal
    cl02570
    Location:30 → 183
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...

  6. XM_012040087.1 → XP_011895477.1  protein FAM13A isoform X1

    See identical proteins and their annotated locations for XP_011895477.1

    UniProtKB/TrEMBL
    A0A2K5NDS4, A0A2K5NDS8
    Related
    ENSCATP00000035657.1, ENSCATT00000059941.1
    Conserved Domains (3) summary
    cd04393
    Location:39 → 226
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
    pfam12361
    Location:349 → 551
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:650 → 852
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  7. XM_012040090.1 → XP_011895480.1  protein FAM13A isoform X3

    UniProtKB/TrEMBL
    A0A2K5NDS8
    Conserved Domains (2) summary
    cd04393
    Location:39 → 226
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
    pfam15905
    Location:636 → 838
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  8. XM_012040089.1 → XP_011895479.1  protein FAM13A isoform X2

    UniProtKB/TrEMBL
    A0A2K5NDS8
    Conserved Domains (2) summary
    cd04393
    Location:39 → 226
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
    pfam15905
    Location:636 → 838
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  9. XM_012040094.1 → XP_011895484.1  protein FAM13A isoform X6

    UniProtKB/TrEMBL
    A0A2K5NDS8
    Related
    ENSCATP00000035662.1, ENSCATT00000059946.1
    Conserved Domains (3) summary
    cd04393
    Location:39 → 226
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
    pfam12361
    Location:316 → 518
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:617 → 819
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  10. XM_012040099.1 → XP_011895489.1  protein FAM13A isoform X11

    See identical proteins and their annotated locations for XP_011895489.1

    UniProtKB/TrEMBL
    A0A2K5NDQ1
    Conserved Domains (2) summary
    pfam12361
    Location:140 → 342
    DBP; Duffy-antigen binding protein
    cl02570
    Location:1 → 17
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...

  11. XM_012040100.1 → XP_011895490.1  protein FAM13A isoform X11

    See identical proteins and their annotated locations for XP_011895490.1

    UniProtKB/TrEMBL
    A0A2K5NDQ1
    Conserved Domains (2) summary
    pfam12361
    Location:140 → 342
    DBP; Duffy-antigen binding protein
    cl02570
    Location:1 → 17
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...

  12. XM_012040096.1 → XP_011895486.1  protein FAM13A isoform X8

    UniProtKB/TrEMBL
    A0A2K5NDQ1
    Conserved Domains (3) summary
    pfam12361
    Location:298 → 500
    DBP; Duffy-antigen binding protein
    pfam15905
    Location:599 → 801
    HMMR_N; Hyaluronan mediated motility receptor N-terminal
    cl02570
    Location:22 → 175
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...

  13. XM_012040098.1 → XP_011895488.1  protein FAM13A isoform X10

    UniProtKB/TrEMBL
    A0A2K5NDQ1
    Conserved Domains (2) summary
    pfam12361
    Location:163 → 365
    DBP; Duffy-antigen binding protein
    cl02570
    Location:1 → 40
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...

  14. XM_012040107.1 → XP_011895497.1  protein FAM13A isoform X17

    Conserved Domains (1) summary
    pfam12361
    Location:77 → 279
    DBP; Duffy-antigen binding protein

  15. XM_012040106.1 → XP_011895496.1  protein FAM13A isoform X16

    Conserved Domains (1) summary
    pfam12361
    Location:56 → 192
    DBP; Duffy-antigen binding protein

  16. XM_012040101.1 → XP_011895491.1  protein FAM13A isoform X12

    UniProtKB/TrEMBL
    A0A2K5NDY3
    Related
    ENSCATP00000035664.1, ENSCATT00000059948.1
    Conserved Domains (1) summary
    pfam12361
    Location:56 → 192
    DBP; Duffy-antigen binding protein

  17. XM_012040104.1 → XP_011895494.1  protein FAM13A isoform X14

    Conserved Domains (1) summary
    pfam12361
    Location:42 → 178
    DBP; Duffy-antigen binding protein

  18. XM_012040102.1 → XP_011895492.1  protein FAM13A isoform X13

    Conserved Domains (1) summary
    pfam12361
    Location:42 → 178
    DBP; Duffy-antigen binding protein

  19. XM_012040105.1 → XP_011895495.1  protein FAM13A isoform X15

    Conserved Domains (1) summary
    pfam12361
    Location:28 → 164
    DBP; Duffy-antigen binding protein
Nucleotide Protein
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