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KNL1 kinetochore scaffold 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105574175, updated on 13-Mar-2024

Summary

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Gene symbol
KNL1
Gene description
kinetochore scaffold 1
See related
Ensembl:ENSCATG00000038686
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012003723.1 (6203373..6263818)

NW_012003723.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 32 Neighboring gene RNA pseudouridine synthase domain containing 2 Neighboring gene protein CASC5-like Neighboring gene RAD51 recombinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012003723.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CASC5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012003723.1 Reference Caty_1.0

    Range
    6203373..6263818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012034789.1 → XP_011890179.1  protein CASC5 isoform X1

    UniProtKB/TrEMBL
    A0A2K5N0S8
    Conserved Domains (2) summary
    pfam08317
    Location:1887 → 2157
    Spc7; Spc7 kinetochore protein
    cl12013
    Location:2004 → 2128
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  2. XM_012034792.1 → XP_011890182.1  protein CASC5 isoform X2

    See identical proteins and their annotated locations for XP_011890182.1

    UniProtKB/TrEMBL
    A0A2K5N0S8
    Related
    ENSCATP00000031108.1, ENSCATT00000055373.1
    Conserved Domains (2) summary
    pfam08317
    Location:1863 → 2133
    Spc7; Spc7 kinetochore protein
    cl12013
    Location:1980 → 2104
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  3. XM_012034793.1 → XP_011890183.1  protein CASC5 isoform X2

    See identical proteins and their annotated locations for XP_011890183.1

    UniProtKB/TrEMBL
    A0A2K5N0S8
    Conserved Domains (2) summary
    pfam08317
    Location:1863 → 2133
    Spc7; Spc7 kinetochore protein
    cl12013
    Location:1980 → 2104
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  4. XM_012034790.1 → XP_011890180.1  protein CASC5 isoform X2

    See identical proteins and their annotated locations for XP_011890180.1

    UniProtKB/TrEMBL
    A0A2K5N0S8
    Conserved Domains (2) summary
    pfam08317
    Location:1863 → 2133
    Spc7; Spc7 kinetochore protein
    cl12013
    Location:1980 → 2104
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  5. XM_012034794.1 → XP_011890184.1  protein CASC5 isoform X2

    See identical proteins and their annotated locations for XP_011890184.1

    UniProtKB/TrEMBL
    A0A2K5N0S8
    Conserved Domains (2) summary
    pfam08317
    Location:1863 → 2133
    Spc7; Spc7 kinetochore protein
    cl12013
    Location:1980 → 2104
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  6. XM_012034796.1 → XP_011890186.1  protein CASC5 isoform X3

    UniProtKB/TrEMBL
    A0A2K5N0S8
    Conserved Domains (2) summary
    pfam08317
    Location:1790 → 2060
    Spc7; Spc7 kinetochore protein
    cl12013
    Location:1907 → 2031
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  7. XM_012034791.1 → XP_011890181.1  protein CASC5 isoform X2

    See identical proteins and their annotated locations for XP_011890181.1

    UniProtKB/TrEMBL
    A0A2K5N0S8
    Conserved Domains (2) summary
    pfam08317
    Location:1863 → 2133
    Spc7; Spc7 kinetochore protein
    cl12013
    Location:1980 → 2104
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

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