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PEX1 peroxisomal biogenesis factor 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105573065, updated on 13-Mar-2024

Summary

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Gene symbol
PEX1
Gene description
peroxisomal biogenesis factor 1
See related
Ensembl:ENSCATG00000034557
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See PEX1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012003328.1 (609622..652186)

NW_012003328.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 133 member B Neighboring gene RNA binding motif protein 48 Neighboring gene uncharacterized LOC105573066 Neighboring gene GATA zinc finger domain containing 1 Neighboring gene mitochondrial intermembrane space import and assembly protein 40 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012003328.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into peroxisome matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome biogenesis factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012003328.1 Reference Caty_1.0

    Range
    609622..652186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012032077.1 → XP_011887467.1  peroxisome biogenesis factor 1 isoform X5

    See identical proteins and their annotated locations for XP_011887467.1

    UniProtKB/TrEMBL
    A0A2K5M9H1
    Conserved Domains (2) summary
    COG0464
    Location:387 → 855
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:669 → 798
    AAA; ATPase family associated with various cellular activities (AAA)

  2. XM_012032072.1 → XP_011887462.1  peroxisome biogenesis factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5M9B7, A0A2K5M9H1
    Related
    ENSCATP00000021795.1, ENSCATT00000045998.1
    Conserved Domains (4) summary
    COG0464
    Location:595 → 1063
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:877 → 1006
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam09262
    Location:104 → 179
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    pfam09263
    Location:19 → 98
    PEX-2N; Peroxisome biogenesis factor 1, N-terminal

  3. XM_012032073.1 → XP_011887463.1  peroxisome biogenesis factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5M9H1
    Conserved Domains (4) summary
    COG0464
    Location:595 → 1063
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:877 → 1006
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam09262
    Location:104 → 179
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    pfam09263
    Location:19 → 98
    PEX-2N; Peroxisome biogenesis factor 1, N-terminal

  4. XM_012032076.1 → XP_011887466.1  peroxisome biogenesis factor 1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5M9G6
    Conserved Domains (4) summary
    smart00382
    Location:762 → 894
    AAA; ATPases associated with a variety of cellular activities
    pfam00004
    Location:762 → 891
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam09262
    Location:104 → 179
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    pfam09263
    Location:19 → 98
    PEX-2N; Peroxisome biogenesis factor 1, N-terminal

  5. XM_012032075.1 → XP_011887465.1  peroxisome biogenesis factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5M9H1
    Conserved Domains (4) summary
    COG0464
    Location:595 → 1063
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:877 → 1006
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam09262
    Location:104 → 179
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    pfam09263
    Location:19 → 98
    PEX-2N; Peroxisome biogenesis factor 1, N-terminal

  6. XM_012032079.1 → XP_011887469.1  peroxisome biogenesis factor 1 isoform X5

    See identical proteins and their annotated locations for XP_011887469.1

    UniProtKB/TrEMBL
    A0A2K5M9H1
    Conserved Domains (2) summary
    COG0464
    Location:387 → 855
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:669 → 798
    AAA; ATPase family associated with various cellular activities (AAA)

  7. XM_012032078.1 → XP_011887468.1  peroxisome biogenesis factor 1 isoform X5

    See identical proteins and their annotated locations for XP_011887468.1

    UniProtKB/TrEMBL
    A0A2K5M9H1
    Conserved Domains (2) summary
    COG0464
    Location:387 → 855
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:669 → 798
    AAA; ATPase family associated with various cellular activities (AAA)

RNA

  1. XR_001010344.1 RNA Sequence

    Related
    ENSCATT00000046013.1
Nucleotide Protein
Heading Accession and Version

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