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KDM6B lysine demethylase 6B [ Mandrillus leucophaeus (drill) ]

Gene ID: 105549864, updated on 13-Mar-2024

Summary

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Gene symbol
KDM6B
Gene description
lysine demethylase 6B
See related
Ensembl:ENSMLEG00000038010
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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See KDM6B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012104920.1 (913796..939099, complement)

NW_012104920.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 3 Neighboring gene cytochrome b5 domain-containing protein 1 Neighboring gene N-alpha-acetyltransferase 38, NatC auxiliary subunit Neighboring gene transmembrane protein 88 Neighboring gene dynein axonemal heavy chain 2 Neighboring gene ephrin B3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012104920.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K27me2/H3K27me3 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MLL3/4 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine-specific demethylase 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012104920.1 Reference Mleu.le_1.0

    Range
    913796..939099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011994537.1 → XP_011849927.1  lysine-specific demethylase 6B

    UniProtKB/TrEMBL
    A0A2K5ZIH3
    Related
    ENSMLEP00000027627.1, ENSMLET00000051177.1
    Conserved Domains (3) summary
    pfam02373
    Location:1368 → 1476
    JmjC; JmjC domain, hydroxylase
    smart00558
    Location:1334 → 1398
    JmjC; A domain family that is part of the cupin metalloenzyme superfamily
    pfam05308
    Location:561 → 636
    Mito_fiss_reg; Mitochondrial fission regulator
Nucleotide Protein
Heading Accession and Version

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