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PHF20L1 PHD finger protein 20 like 1 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105537487, updated on 13-Mar-2024

Summary

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Gene symbol
PHF20L1
Gene description
PHD finger protein 20 like 1
See related
Ensembl:ENSMLEG00000031878
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012101732.1 (4578159..4653250, complement)

NW_012101732.1Genomic Context describing neighboring genes Neighboring gene cellular communication network factor 4 Neighboring gene thyroglobulin Neighboring gene Src like adaptor Neighboring gene transmembrane protein 71 Neighboring gene dynein axonemal assembly factor 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012101732.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PHD finger protein 20-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012101732.1 Reference Mleu.le_1.0

    Range
    4578159..4653250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011977098.1 → XP_011832488.1  PHD finger protein 20-like protein 1 isoform X3

    See identical proteins and their annotated locations for XP_011832488.1

    UniProtKB/TrEMBL
    A0A2K5YJE7, A0A2K5YJL5
    Related
    ENSMLEP00000015694.1, ENSMLET00000039155.1
    Conserved Domains (4) summary
    cd15633
    Location:657 → 702
    PHD_PHF20L1; PHD finger found in PHD finger protein 20-like protein 1 (P20L1)
    pfam16660
    Location:292 → 357
    PHD20L1_u1; PHD finger protein 20-like protein 1
    cd20454
    Location:86 → 144
    Tudor_PHF20L1; Tudor domain found in PHD finger protein 20-like protein 1 (PHF20L1) and similar proteins
    cl17705
    Location:3 → 68
    MBT; mbt repeat

  2. XM_011977097.1 → XP_011832487.1  PHD finger protein 20-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_011832487.1

    UniProtKB/TrEMBL
    A0A2K5YJJ5, A0A2K5YJL5
    Related
    ENSMLEP00000015690.1, ENSMLET00000039151.1
    Conserved Domains (4) summary
    cd15633
    Location:683 → 728
    PHD_PHF20L1; PHD finger found in PHD finger protein 20-like protein 1 (P20L1)
    pfam16660
    Location:318 → 383
    PHD20L1_u1; PHD finger protein 20-like protein 1
    cd20454
    Location:86 → 143
    Tudor_PHF20L1; Tudor domain found in PHD finger protein 20-like protein 1 (PHF20L1) and similar proteins
    cl17705
    Location:3 → 68
    MBT; mbt repeat

  3. XM_011977096.1 → XP_011832486.1  PHD finger protein 20-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5YJL5
    Related
    ENSMLEP00000015710.1, ENSMLET00000039171.1
    Conserved Domains (4) summary
    cd15633
    Location:683 → 728
    PHD_PHF20L1; PHD finger found in PHD finger protein 20-like protein 1 (P20L1)
    pfam16660
    Location:318 → 383
    PHD20L1_u1; PHD finger protein 20-like protein 1
    cd20454
    Location:86 → 143
    Tudor_PHF20L1; Tudor domain found in PHD finger protein 20-like protein 1 (PHF20L1) and similar proteins
    cl17705
    Location:3 → 68
    MBT; mbt repeat

  4. XM_011977099.1 → XP_011832489.1  PHD finger protein 20-like protein 1 isoform X4

    See identical proteins and their annotated locations for XP_011832489.1

    Conserved Domains (2) summary
    cd20454
    Location:86 → 144
    Tudor_PHF20L1; Tudor domain found in PHD finger protein 20-like protein 1 (PHF20L1) and similar proteins
    cl17705
    Location:3 → 68
    MBT; mbt repeat
Nucleotide Protein
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