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TRIM22 tripartite motif containing 22 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105533503, updated on 13-Mar-2024

Summary

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Gene symbol
TRIM22
Gene description
tripartite motif containing 22
See related
Ensembl:ENSMLEG00000036149
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human all
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Genomic context

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See TRIM22 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012100921.1 (254655..277742)

NW_012100921.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 34 Neighboring gene tripartite motif containing 5 Neighboring gene olfactory receptor 52H1-like Neighboring gene olfactory receptor 52H1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012100921.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012100921.1 Reference Mleu.le_1.0

    Range
    254655..277742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011971979.1 → XP_011827369.1  E3 ubiquitin-protein ligase TRIM22 isoform X1

    UniProtKB/TrEMBL
    A0A2K5Z811, A0A2K5Z839
    Related
    ENSMLEP00000023961.1, ENSMLET00000047483.1
    Conserved Domains (5) summary
    smart00336
    Location:92 → 133
    BBOX; B-Box-type zinc finger
    COG1579
    Location:129 → 268
    COG1579; Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]
    pfam15035
    Location:142 → 205
    Rootletin; Ciliary rootlet component, centrosome cohesion
    cl02614
    Location:299 → 496
    SPRY; SPRY domain
    cl17238
    Location:15 → 59
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  2. XM_011971980.1 → XP_011827370.1  E3 ubiquitin-protein ligase TRIM22 isoform X2

    UniProtKB/TrEMBL
    A0A2K5Z839
    Conserved Domains (4) summary
    smart00336
    Location:92 → 133
    BBOX; B-Box-type zinc finger
    pfam05276
    Location:123 → 227
    SH3BP5; SH3 domain-binding protein 5 (SH3BP5)
    cd15824
    Location:295 → 492
    SPRY_PRY_TRIM22; PRY/SPRY domain in tripartite motif-containing protein 22 (TRIM22), also known as RING finger protein 94 (RNF94) or Stimulated trans-acting factor of 50 kDa (STAF50)
    cl17238
    Location:15 → 59
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
Nucleotide Protein
Heading Accession and Version

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