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SNX1 sorting nexin 1 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105530347, updated on 13-Mar-2024

Summary

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Gene symbol
SNX1
Gene description
sorting nexin 1
See related
Ensembl:ENSMLEG00000033222
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012100320.1 (2024287..2073078)

NW_012100320.1Genomic Context describing neighboring genes Neighboring gene death associated protein kinase 2 Neighboring gene cytosolic iron-sulfur assembly component 2A Neighboring gene sorting nexin 22 Neighboring gene peptidylprolyl isomerase B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012100320.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012100320.1 Reference Mleu.le_1.0

    Range
    2024287..2073078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011967863.1 → XP_011823253.1  sorting nexin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5YS20, A0A2K5YS48
    Related
    ENSMLEP00000018324.1, ENSMLET00000041807.1
    Conserved Domains (3) summary
    cd07281
    Location:145 → 268
    PX_SNX1; The phosphoinositide binding Phox Homology domain of Sorting Nexin 1
    pfam03700
    Location:55 → 130
    Sorting_nexin; Sorting nexin, N-terminal domain
    cl12013
    Location:286 → 506
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  2. XM_011967868.1 → XP_011823258.1  sorting nexin-1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5YS09, A0A2K5YS48
    Related
    ENSMLEP00000018347.1, ENSMLET00000041830.1
    Conserved Domains (3) summary
    cd07281
    Location:145 → 268
    PX_SNX1; The phosphoinositide binding Phox Homology domain of Sorting Nexin 1
    cd07665
    Location:286 → 519
    BAR_SNX1; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1
    pfam03700
    Location:55 → 130
    Sorting_nexin; Sorting nexin, N-terminal domain

  3. XM_011967876.1 → XP_011823266.1  sorting nexin-1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5YS27, A0A2K5YS48
    Related
    ENSMLEP00000018358.1, ENSMLET00000041841.1
    Conserved Domains (3) summary
    cd07665
    Location:221 → 454
    BAR_SNX1; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1
    pfam03700
    Location:55 → 90
    Sorting_nexin; Sorting nexin, N-terminal domain
    cl02563
    Location:91 → 203
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
Nucleotide Protein
Heading Accession and Version

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