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ABLIM1 actin binding LIM protein 1 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105530131, updated on 13-Mar-2024

Summary

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Gene symbol
ABLIM1
Gene description
actin binding LIM protein 1
See related
Ensembl:ENSMLEG00000031008
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012108697.1 (928756..1206073)

NW_012108697.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L15-like Neighboring gene FHF complex subunit HOOK interacting protein 2A Neighboring gene actin filament associated protein 1 like 2 Neighboring gene von Willebrand factor A domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012108697.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lamellipodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-binding LIM protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012108697.1 Reference Mleu.le_1.0

    Range
    928756..1206073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011967491.1 → XP_011822881.1  actin-binding LIM protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5YE54, A0A2K5YE78
    Related
    ENSMLEP00000013826.1, ENSMLET00000037269.1
    Conserved Domains (6) summary
    smart00153
    Location:713 → 748
    VHP; Villin headpiece domain
    cd09327
    Location:39 → 90
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:95 → 150
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:166 → 217
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:225 → 280
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:318 → 712
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  2. XM_011967492.1 → XP_011822882.1  actin-binding LIM protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5YE78
    Related
    ENSMLEP00000013859.1, ENSMLET00000037302.1
    Conserved Domains (6) summary
    smart00153
    Location:711 → 746
    VHP; Villin headpiece domain
    cd09327
    Location:39 → 90
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:95 → 150
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:166 → 217
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:225 → 280
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:318 → 710
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  3. XM_011967493.1 → XP_011822883.1  actin-binding LIM protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5YE78
    Related
    ENSMLEP00000013864.1, ENSMLET00000037307.1
    Conserved Domains (6) summary
    smart00153
    Location:683 → 718
    VHP; Villin headpiece domain
    cd09327
    Location:39 → 90
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:95 → 150
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:166 → 217
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:225 → 280
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:290 → 682
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  4. XM_011967490.1 → XP_011822880.1  actin-binding LIM protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5YE73, A0A2K5YE78
    Related
    ENSMLEP00000013867.1, ENSMLET00000037310.1
    Conserved Domains (6) summary
    smart00153
    Location:743 → 778
    VHP; Villin headpiece domain
    cd09327
    Location:99 → 150
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:155 → 210
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:226 → 277
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:285 → 340
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:350 → 742
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  5. XM_011967495.1 → XP_011822885.1  actin-binding LIM protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A2K5YED1
    Related
    ENSMLEP00000013880.1, ENSMLET00000037323.1
    Conserved Domains (6) summary
    smart00153
    Location:620 → 655
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:150 → 201
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:209 → 264
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 619
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  6. XM_011967496.1 → XP_011822886.1  actin-binding LIM protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A2K5YEB7
    Related
    ENSMLEP00000013891.1, ENSMLET00000037334.1
    Conserved Domains (3) summary
    smart00153
    Location:420 → 455
    VHP; Villin headpiece domain
    pfam16182
    Location:62 → 419
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
    cl02475
    Location:1 → 24
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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