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SHROOM2 shroom family member 2 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105529655, updated on 13-Mar-2024

Summary

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Gene symbol
SHROOM2
Gene description
shroom family member 2
See related
Ensembl:ENSMLEG00000031458
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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See SHROOM2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012108441.1 (932769..1016092, complement)

NW_012108441.1Genomic Context describing neighboring genes Neighboring gene WWC family member 3 Neighboring gene claudin 34 Neighboring gene eukaryotic translation initiation factor 5 pseudogene Neighboring gene uncharacterized LOC105529651

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012108441.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Shroom2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012108441.1 Reference Mleu.le_1.0

    Range
    932769..1016092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011966841.1 → XP_011822231.1  protein Shroom2

    UniProtKB/TrEMBL
    A0A2K5YGC7
    Related
    ENSMLEP00000014590.1, ENSMLET00000038041.1
    Conserved Domains (3) summary
    smart00228
    Location:8 → 61
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    pfam08687
    Location:1265 → 1475
    ASD2; Apx/Shroom domain ASD2
    pfam08688
    Location:587 → 749
    ASD1; Apx/Shroom domain ASD1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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