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STXBP5 syntaxin binding protein 5 [ Colobus angolensis palliatus ]

Gene ID: 105524244, updated on 13-Mar-2024

Summary

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Gene symbol
STXBP5
Gene description
syntaxin binding protein 5
See related
Ensembl:ENSCANG00000031886
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012118410.1 (316493..525860, complement)

NW_012118410.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 5 Neighboring gene transcriptional coactivator YAP1 pseudogene Neighboring gene uncharacterized LOC105524246 Neighboring gene uncharacterized LOC105524247

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012118410.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin II binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-binding protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012118410.1 Reference Cang.pa_1.0

    Range
    316493..525860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011959439.1 → XP_011814829.1  syntaxin-binding protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A2K5IK78, A0A2K5IKF9
    Related
    ENSCANP00000017074.1, ENSCANT00000040019.1
    Conserved Domains (5) summary
    COG2319
    Location:66 → 491
    WD40; WD40 repeat [General function prediction only]
    cd15893
    Location:1051 → 1111
    R-SNARE_STXBP5; SNARE domain of STXBP5
    pfam08366
    Location:279 → 386
    LLGL; LLGL2
    sd00039
    Location:64 → 97
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:64 → 282
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_011959438.1 → XP_011814828.1  syntaxin-binding protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A2K5IK51, A0A2K5IKF9
    Related
    ENSCANP00000017073.1, ENSCANT00000040017.1
    Conserved Domains (5) summary
    COG2319
    Location:66 → 491
    WD40; WD40 repeat [General function prediction only]
    cd15893
    Location:1087 → 1147
    R-SNARE_STXBP5; SNARE domain of STXBP5
    pfam08366
    Location:279 → 386
    LLGL; LLGL2
    sd00039
    Location:64 → 97
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:64 → 282
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_011959440.1 → XP_011814830.1  syntaxin-binding protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A2K5IKD3, A0A2K5IKF9
    Related
    ENSCANP00000017065.1, ENSCANT00000040009.1
    Conserved Domains (5) summary
    COG2319
    Location:66 → 491
    WD40; WD40 repeat [General function prediction only]
    cd15893
    Location:1034 → 1094
    R-SNARE_STXBP5; SNARE domain of STXBP5
    pfam08366
    Location:279 → 386
    LLGL; LLGL2
    sd00039
    Location:64 → 97
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:64 → 282
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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