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ARID2 AT-rich interaction domain 2 [ Colobus angolensis palliatus ]

Gene ID: 105507554, updated on 13-Mar-2024

Summary

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Gene symbol
ARID2
Gene description
AT-rich interaction domain 2
See related
Ensembl:ENSCANG00000042678
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See ARID2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012114600.1 (1440836..1627538, complement)

NW_012114600.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene SR-related CTD associated factor 11 Neighboring gene uncharacterized LOC105507555 Neighboring gene arginine-fifty homeobox-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012114600.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF superfamily-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012114600.1 Reference Cang.pa_1.0

    Range
    1440836..1627538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011936060.1 → XP_011791450.1  AT-rich interactive domain-containing protein 2

    UniProtKB/TrEMBL
    A0A2K5KA87
    Related
    ENSCANP00000038007.1, ENSCANT00000061261.1
    Conserved Domains (2) summary
    pfam01388
    Location:19 → 101
    ARID; ARID/BRIGHT DNA binding domain
    pfam02257
    Location:521 → 601
    RFX_DNA_binding; RFX DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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