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AJUBA ajuba LIM protein [ Colobus angolensis palliatus ]

Gene ID: 105503783, updated on 13-Mar-2024

Summary

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Gene symbol
AJUBA
Gene description
ajuba LIM protein
See related
Ensembl:ENSCANG00000042060
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012122709.1 (5055150..5067244)

NW_012122709.1Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit beta 5 Neighboring gene chromosome unknown open reading frame, human C14orf93 Neighboring gene HAUS augmin like complex subunit 4 Neighboring gene protein arginine methyltransferase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012122709.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of miRNA-mediated gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain-containing protein ajuba

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012122709.1 Reference Cang.pa_1.0

    Range
    5055150..5067244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011930884.1 → XP_011786274.1  LIM domain-containing protein ajuba isoform X1

    UniProtKB/TrEMBL
    A0A2K5K6Q5, A0A2K5K6R8
    Related
    ENSCANP00000036776.1, ENSCANT00000060025.1
    Conserved Domains (3) summary
    cd09352
    Location:338 → 391
    LIM1_Ajuba_like; The first LIM domain of Ajuba-like proteins
    cd09355
    Location:403 → 455
    LIM2_Ajuba_like; The second LIM domain of Ajuba-like proteins
    cd09438
    Location:463 → 524
    LIM3_Ajuba_like; The third LIM domain of Ajuba-like proteins

  2. XM_011930885.1 → XP_011786275.1  LIM domain-containing protein ajuba isoform X2

    Conserved Domains (1) summary
    cl02475
    Location:46 → 107
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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