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PDCD4 programmed cell death 4 [ Colobus angolensis palliatus ]

Gene ID: 105501804, updated on 13-Mar-2024

Summary

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Gene symbol
PDCD4
Gene description
programmed cell death 4
See related
Ensembl:ENSCANG00000027874
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012121265.1 (8305847..8333365, complement)

NW_012121265.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105501830 Neighboring gene SHOC2 leucine rich repeat scaffold protein Neighboring gene BBSome interacting protein 1 Neighboring gene RNA binding motif protein 20 Neighboring gene structural maintenance of chromosomes 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012121265.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
programmed cell death protein 4
Names
programmed cell death 4 (neoplastic transformation inhibitor)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012121265.1 Reference Cang.pa_1.0

    Range
    8305847..8333365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011927878.1 → XP_011783268.1  programmed cell death protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A2K5HXU2
    Conserved Domains (1) summary
    smart00544
    Location:313 → 426
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins

  2. XM_011927876.1 → XP_011783266.1  programmed cell death protein 4 isoform X1

    See identical proteins and their annotated locations for XP_011783266.1

    UniProtKB/TrEMBL
    A0A2K5HXU2, A0A2K5HXV8
    Related
    ENSCANP00000009183.1, ENSCANT00000032052.1
    Conserved Domains (1) summary
    smart00544
    Location:327 → 440
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins

  3. XM_011927877.1 → XP_011783267.1  programmed cell death protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A2K5HXU2, A0A2K5HY10
    Related
    ENSCANP00000009181.1, ENSCANT00000032050.1
    Conserved Domains (1) summary
    smart00544
    Location:316 → 429
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
Nucleotide Protein
Heading Accession and Version

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