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RUNX1T1 RUNX1 partner transcriptional co-repressor 1 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105497264, updated on 13-Mar-2024

Summary

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Gene symbol
RUNX1T1
Gene description
RUNX1 partner transcriptional co-repressor 1
See related
Ensembl:ENSMNEG00000042108
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012011911.1 (9643004..9790841)

NW_012011911.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit NDUFA4 pseudogene Neighboring gene uncharacterized LOC105497262 Neighboring gene 28S ribosomal protein S16, mitochondrial pseudogene Neighboring gene uncharacterized LOC105497267 Neighboring gene uncharacterized LOC105497266

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012011911 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CBFA2T1
Names
RUNX1 translocation partner 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012011911.1 Reference Mnem_1.0

    Range
    9643004..9790841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011768270.2 → XP_011766572.1  protein CBFA2T1 isoform X4

    See identical proteins and their annotated locations for XP_011766572.1

    UniProtKB/TrEMBL
    A0A2K6DQK4, A0A2K6DQV9
    Related
    ENSMNEP00000038205.1, ENSMNET00000062681.1
    Conserved Domains (4) summary
    COG1390
    Location:416 → 487
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:310 → 376
    NHR2; NHR2 domain like
    pfam01753
    Location:488 → 524
    zf-MYND; MYND finger
    pfam07531
    Location:95 → 183
    TAFH; NHR1 homology to TAF

  2. XM_011768263.2 → XP_011766565.1  protein CBFA2T1 isoform X2

    See identical proteins and their annotated locations for XP_011766565.1

    UniProtKB/TrEMBL
    A0A2K6DQL1, A0A2K6DQV9
    Conserved Domains (4) summary
    COG1390
    Location:443 → 514
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:337 → 403
    NHR2; NHR2 domain like
    pfam01753
    Location:515 → 551
    zf-MYND; MYND finger
    pfam07531
    Location:122 → 210
    TAFH; NHR1 homology to TAF

  3. XM_011768268.2 → XP_011766570.1  protein CBFA2T1 isoform X3

    UniProtKB/TrEMBL
    A0A2K6DQL4, A0A2K6DQV9
    Related
    ENSMNEP00000038208.1, ENSMNET00000062684.1
    Conserved Domains (4) summary
    COG1390
    Location:423 → 494
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:317 → 383
    NHR2; NHR2 domain like
    pfam01753
    Location:495 → 531
    zf-MYND; MYND finger
    pfam07531
    Location:102 → 190
    TAFH; NHR1 homology to TAF

  4. XM_024797728.1 → XP_024653496.1  protein CBFA2T1 isoform X5

    UniProtKB/TrEMBL
    A0A2K6DQT2, A0A2K6DQX0
    Conserved Domains (4) summary
    COG1390
    Location:406 → 477
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:300 → 366
    NHR2; NHR2 domain like
    pfam01753
    Location:478 → 514
    zf-MYND; MYND finger
    pfam07531
    Location:85 → 173
    TAFH; NHR1 homology to TAF

  5. XM_011768261.2 → XP_011766563.1  protein CBFA2T1 isoform X1

    See identical proteins and their annotated locations for XP_011766563.1

    UniProtKB/TrEMBL
    A0A2K6DQL7, A0A2K6DQV9
    Related
    ENSMNEP00000038213.1, ENSMNET00000062690.1
    Conserved Domains (4) summary
    pfam04094
    Location:478 → 615
    DUF390; Protein of unknown function (DUF390)
    pfam08788
    Location:348 → 414
    NHR2; NHR2 domain like
    pfam01753
    Location:526 → 562
    zf-MYND; MYND finger
    pfam07531
    Location:133 → 219
    TAFH; NHR1 homology to TAF

  6. XM_011768266.2 → XP_011766568.1  protein CBFA2T1 isoform X2

    See identical proteins and their annotated locations for XP_011766568.1

    UniProtKB/TrEMBL
    A0A2K6DQL1, A0A2K6DQV9
    Related
    ENSMNEP00000038219.1, ENSMNET00000062696.1
    Conserved Domains (4) summary
    COG1390
    Location:443 → 514
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:337 → 403
    NHR2; NHR2 domain like
    pfam01753
    Location:515 → 551
    zf-MYND; MYND finger
    pfam07531
    Location:122 → 210
    TAFH; NHR1 homology to TAF

  7. XM_024797725.1 → XP_024653493.1  protein CBFA2T1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6DQL1, A0A2K6DQV9
    Conserved Domains (4) summary
    COG1390
    Location:443 → 514
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:337 → 403
    NHR2; NHR2 domain like
    pfam01753
    Location:515 → 551
    zf-MYND; MYND finger
    pfam07531
    Location:122 → 210
    TAFH; NHR1 homology to TAF

  8. XM_011768271.2 → XP_011766573.1  protein CBFA2T1 isoform X4

    See identical proteins and their annotated locations for XP_011766573.1

    UniProtKB/TrEMBL
    A0A2K6DQK4, A0A2K6DQV9
    Conserved Domains (4) summary
    COG1390
    Location:416 → 487
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:310 → 376
    NHR2; NHR2 domain like
    pfam01753
    Location:488 → 524
    zf-MYND; MYND finger
    pfam07531
    Location:95 → 183
    TAFH; NHR1 homology to TAF

  9. XM_024797729.1 → XP_024653497.1  protein CBFA2T1 isoform X5

    UniProtKB/TrEMBL
    A0A2K6DQT2, A0A2K6DQX0
    Conserved Domains (4) summary
    COG1390
    Location:406 → 477
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:300 → 366
    NHR2; NHR2 domain like
    pfam01753
    Location:478 → 514
    zf-MYND; MYND finger
    pfam07531
    Location:85 → 173
    TAFH; NHR1 homology to TAF

  10. XM_011768272.2 → XP_011766574.1  protein CBFA2T1 isoform X5

    See identical proteins and their annotated locations for XP_011766574.1

    UniProtKB/TrEMBL
    A0A2K6DQT2, A0A2K6DQX0
    Related
    ENSMNEP00000038301.1, ENSMNET00000062778.1
    Conserved Domains (4) summary
    COG1390
    Location:406 → 477
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:300 → 366
    NHR2; NHR2 domain like
    pfam01753
    Location:478 → 514
    zf-MYND; MYND finger
    pfam07531
    Location:85 → 173
    TAFH; NHR1 homology to TAF

  11. XM_011768262.2 → XP_011766564.1  protein CBFA2T1 isoform X2

    See identical proteins and their annotated locations for XP_011766564.1

    UniProtKB/TrEMBL
    A0A2K6DQL1, A0A2K6DQV9
    Conserved Domains (4) summary
    COG1390
    Location:443 → 514
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:337 → 403
    NHR2; NHR2 domain like
    pfam01753
    Location:515 → 551
    zf-MYND; MYND finger
    pfam07531
    Location:122 → 210
    TAFH; NHR1 homology to TAF

  12. XM_011768269.2 → XP_011766571.1  protein CBFA2T1 isoform X4

    See identical proteins and their annotated locations for XP_011766571.1

    UniProtKB/TrEMBL
    A0A2K6DQK4, A0A2K6DQV9
    Conserved Domains (4) summary
    COG1390
    Location:416 → 487
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:310 → 376
    NHR2; NHR2 domain like
    pfam01753
    Location:488 → 524
    zf-MYND; MYND finger
    pfam07531
    Location:95 → 183
    TAFH; NHR1 homology to TAF

  13. XM_024797727.1 → XP_024653495.1  protein CBFA2T1 isoform X5

    UniProtKB/TrEMBL
    A0A2K6DQT2, A0A2K6DQX0
    Conserved Domains (4) summary
    COG1390
    Location:406 → 477
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:300 → 366
    NHR2; NHR2 domain like
    pfam01753
    Location:478 → 514
    zf-MYND; MYND finger
    pfam07531
    Location:85 → 173
    TAFH; NHR1 homology to TAF

  14. XM_011768265.2 → XP_011766567.1  protein CBFA2T1 isoform X2

    See identical proteins and their annotated locations for XP_011766567.1

    UniProtKB/TrEMBL
    A0A2K6DQL1, A0A2K6DQV9
    Conserved Domains (4) summary
    COG1390
    Location:443 → 514
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:337 → 403
    NHR2; NHR2 domain like
    pfam01753
    Location:515 → 551
    zf-MYND; MYND finger
    pfam07531
    Location:122 → 210
    TAFH; NHR1 homology to TAF

  15. XM_024797726.1 → XP_024653494.1  protein CBFA2T1 isoform X5

    UniProtKB/TrEMBL
    A0A2K6DQT2, A0A2K6DQX0
    Conserved Domains (4) summary
    COG1390
    Location:406 → 477
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:300 → 366
    NHR2; NHR2 domain like
    pfam01753
    Location:478 → 514
    zf-MYND; MYND finger
    pfam07531
    Location:85 → 173
    TAFH; NHR1 homology to TAF

  16. XM_024797724.1 → XP_024653492.1  protein CBFA2T1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6DQL1, A0A2K6DQV9
    Conserved Domains (4) summary
    COG1390
    Location:443 → 514
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:337 → 403
    NHR2; NHR2 domain like
    pfam01753
    Location:515 → 551
    zf-MYND; MYND finger
    pfam07531
    Location:122 → 210
    TAFH; NHR1 homology to TAF

  17. XM_011768273.2 → XP_011766575.1  protein CBFA2T1 isoform X5

    See identical proteins and their annotated locations for XP_011766575.1

    UniProtKB/TrEMBL
    A0A2K6DQT2, A0A2K6DQX0
    Related
    ENSMNEP00000038279.1, ENSMNET00000062756.1
    Conserved Domains (4) summary
    COG1390
    Location:406 → 477
    NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
    pfam08788
    Location:300 → 366
    NHR2; NHR2 domain like
    pfam01753
    Location:478 → 514
    zf-MYND; MYND finger
    pfam07531
    Location:85 → 173
    TAFH; NHR1 homology to TAF
Nucleotide Protein
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