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UTP4 UTP4 small subunit processome component [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105491362, updated on 13-Mar-2024

Summary

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Gene symbol
UTP4
Gene description
UTP4 small subunit processome component
See related
Ensembl:ENSMNEG00000038546
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012011355.1 (14478357..14522519, complement)

NW_012011355.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 4 homolog A Neighboring gene syntrophin beta 2 Neighboring gene zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene Neighboring gene uncharacterized LOC105491363 Neighboring gene chromosome transmission fidelity factor 8 Neighboring gene hyaluronan synthase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012011355 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of t-UTP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar RNA-associated protein 4 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012011355.1 Reference Mnem_1.0

    Range
    14478357..14522519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011757703.2 → XP_011756005.1  U3 small nucleolar RNA-associated protein 4 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2K6D2V5
    Related
    ENSMNEP00000030237.1, ENSMNET00000054653.1
    Conserved Domains (3) summary
    COG2319
    Location:17 → 363
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:20 → 76
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:16 → 247
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_011757704.1 → XP_011756006.1  U3 small nucleolar RNA-associated protein 4 homolog isoform X2

    Conserved Domains (3) summary
    COG2319
    Location:99 → 451
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:304 → 340
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:59 → 172
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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