U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRIM9 tripartite motif containing 9 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105481832, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRIM9
Gene description
tripartite motif containing 9
See related
Ensembl:ENSMNEG00000029312
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012019132.1 (4186183..4305229)

NW_012019132.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene uncharacterized LOC112426679 Neighboring gene thioredoxin related transmembrane protein 1 Neighboring gene glycogen phosphorylase L Neighboring gene abhydrolase domain containing 12B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012019132 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase TRIM9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012019132.1 Reference Mnem_1.0

    Range
    4186183..4305229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024792879.1 → XP_024648647.1  E3 ubiquitin-protein ligase TRIM9 isoform X1

    UniProtKB/TrEMBL
    A0A2K6BEK1, A0A2K6BEQ1
    Related
    ENSMNEP00000009836.1, ENSMNET00000034011.1
    Conserved Domains (5) summary
    smart00502
    Location:273 → 399
    BBC; B-Box C-terminal domain
    smart00336
    Location:224 → 266
    BBOX; B-Box-type zinc finger
    cd00063
    Location:449 → 528
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12889
    Location:616 → 773
    SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
    cl17238
    Location:5 → 52
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  2. XM_024792881.1 → XP_024648649.1  E3 ubiquitin-protein ligase TRIM9 isoform X3

    UniProtKB/TrEMBL
    A0A2K6BEQ1
    Related
    ENSMNEP00000009862.1, ENSMNET00000034037.1
    Conserved Domains (6) summary
    smart00502
    Location:273 → 399
    BBC; B-Box C-terminal domain
    cd00063
    Location:453 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12889
    Location:620 → 767
    SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
    cd16755
    Location:5 → 52
    RING-HC_TRIM9; RING finger, HC subclass, found in tripartite motif-containing protein 9 (TRIM9) and similar proteins
    cd19826
    Location:223 → 271
    Bbox2_TRIM9_C-I; B-box-type 2 zinc finger found in tripartite motif-containing protein 9 (TRIM9) and similar proteins
    cd19843
    Location:166 → 212
    Bbox1_TRIM9_C-I; B-box-type 1 zinc finger found in tripartite motif-containing protein 9 (TRIM9) and similar proteins

  3. XM_024792884.1 → XP_024648652.1  E3 ubiquitin-protein ligase TRIM9 isoform X6

    UniProtKB/TrEMBL
    A0A2K6BEQ1
    Conserved Domains (5) summary
    smart00502
    Location:273 → 399
    BBC; B-Box C-terminal domain
    smart00336
    Location:224 → 266
    BBOX; B-Box-type zinc finger
    cd00063
    Location:453 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12889
    Location:557 → 704
    SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
    cd16755
    Location:5 → 52
    RING-HC_TRIM9; RING finger, HC subclass, found in tripartite motif-containing protein 9 (TRIM9) and similar proteins

  4. XM_024792880.1 → XP_024648648.1  E3 ubiquitin-protein ligase TRIM9 isoform X2

    UniProtKB/TrEMBL
    A0A2K6BEQ1
    Conserved Domains (6) summary
    smart00502
    Location:273 → 399
    BBC; B-Box C-terminal domain
    cd00063
    Location:453 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12889
    Location:620 → 785
    SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
    cd16755
    Location:5 → 52
    RING-HC_TRIM9; RING finger, HC subclass, found in tripartite motif-containing protein 9 (TRIM9) and similar proteins
    cd19826
    Location:223 → 271
    Bbox2_TRIM9_C-I; B-box-type 2 zinc finger found in tripartite motif-containing protein 9 (TRIM9) and similar proteins
    cd19843
    Location:166 → 212
    Bbox1_TRIM9_C-I; B-box-type 1 zinc finger found in tripartite motif-containing protein 9 (TRIM9) and similar proteins

  5. XM_024792882.1 → XP_024648650.1  E3 ubiquitin-protein ligase TRIM9 isoform X4

    UniProtKB/TrEMBL
    A0A2K6BEQ1
    Conserved Domains (5) summary
    smart00502
    Location:273 → 399
    BBC; B-Box C-terminal domain
    smart00336
    Location:224 → 266
    BBOX; B-Box-type zinc finger
    cd00063
    Location:453 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12889
    Location:557 → 722
    SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
    cd16755
    Location:5 → 52
    RING-HC_TRIM9; RING finger, HC subclass, found in tripartite motif-containing protein 9 (TRIM9) and similar proteins

  6. XM_024792883.1 → XP_024648651.1  E3 ubiquitin-protein ligase TRIM9 isoform X5

    UniProtKB/TrEMBL
    A0A2K6BEQ1
    Conserved Domains (6) summary
    smart00502
    Location:273 → 399
    BBC; B-Box C-terminal domain
    cd00063
    Location:453 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12889
    Location:529 → 708
    SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
    cd16755
    Location:5 → 52
    RING-HC_TRIM9; RING finger, HC subclass, found in tripartite motif-containing protein 9 (TRIM9) and similar proteins
    cd19826
    Location:223 → 271
    Bbox2_TRIM9_C-I; B-box-type 2 zinc finger found in tripartite motif-containing protein 9 (TRIM9) and similar proteins
    cd19843
    Location:166 → 212
    Bbox1_TRIM9_C-I; B-box-type 1 zinc finger found in tripartite motif-containing protein 9 (TRIM9) and similar proteins

  7. XM_011741595.1 → XP_011739897.1  E3 ubiquitin-protein ligase TRIM9 isoform X7

    See identical proteins and their annotated locations for XP_011739897.1

    UniProtKB/TrEMBL
    A0A2K6BEL7, A0A2K6BEQ1
    Related
    ENSMNEP00000009849.1, ENSMNET00000034024.1
    Conserved Domains (5) summary
    smart00502
    Location:273 → 399
    BBC; B-Box C-terminal domain
    smart00336
    Location:224 → 266
    BBOX; B-Box-type zinc finger
    cd00063
    Location:453 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12889
    Location:529 → 700
    SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
    cd16755
    Location:5 → 52
    RING-HC_TRIM9; RING finger, HC subclass, found in tripartite motif-containing protein 9 (TRIM9) and similar proteins

RNA

  1. XR_003018065.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.