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NOP56 NOP56 ribonucleoprotein [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105481621, updated on 11-Apr-2024

Summary

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Gene symbol
NOP56
Gene description
NOP56 ribonucleoprotein
See related
Ensembl:ENSMNEG00000033186
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012018910.1 (13656898..13663085, complement)

NW_012018910.1Genomic Context describing neighboring genes Neighboring gene EBF family member 4 Neighboring gene small nucleolar RNA SNORD57 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene small nucleolar RNA SNORD86 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene small nucleolar RNA SNORD110 Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta Neighboring gene transmembrane channel like 2 Neighboring gene zinc finger protein 343

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012018910 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of box C/D methylation guide snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar protein 56

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012018910.1 Reference Mnem_1.0

    Range
    13656898..13663085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011741349.1 → XP_011739651.1  nucleolar protein 56 isoform X1

    UniProtKB/TrEMBL
    A0A2K6C4I2
    Related
    ENSMNEP00000018564.1, ENSMNET00000042800.1
    Conserved Domains (3) summary
    smart00931
    Location:168 → 219
    NOSIC; NOSIC (NUC001) domain
    COG1498
    Location:48 → 416
    SIK1; RNA processing factor Prp31, contains Nop domain [Translation, ribosomal structure and biogenesis]
    pfam08156
    Location:5 → 70
    NOP5NT; NOP5NT (NUC127) domain

  2. XM_011741350.1 → XP_011739652.1  nucleolar protein 56 isoform X2

    See identical proteins and their annotated locations for XP_011739652.1

    Conserved Domains (3) summary
    smart00931
    Location:168 → 219
    NOSIC; NOSIC (NUC001) domain
    COG1498
    Location:48 → 416
    SIK1; RNA processing factor Prp31, contains Nop domain [Translation, ribosomal structure and biogenesis]
    pfam08156
    Location:5 → 70
    NOP5NT; NOP5NT (NUC127) domain
Nucleotide Protein
Heading Accession and Version

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