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Trnat-ugu transfer RNA threonine (anticodon UGU) [ Wasmannia auropunctata (little fire ant) ]

Gene ID: 105447676, updated on 13-Feb-2021

Summary

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Gene symbol
Trnat-ugu
Gene description
transfer RNA threonine (anticodon UGU)
Gene type
tRNA
RefSeq status
MODEL
Organism
Wasmannia auropunctata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Wasmannia
Summary
This record serves to anchor the annotations of this class of tRNAs at multiple locations on the little fire ant genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 902310
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Genomic context

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Location:
chromosome: Un
Annotation release Status Assembly Chr Location
100 current wasmannia.A_1.0 (GCF_000956235.1) Unplaced Scaffold NW_012026798.1 (1737734..1737806, complement)
100 current wasmannia.A_1.0 (GCF_000956235.1) Unplaced Scaffold NW_012026925.1 (442532..442604, complement)

NW_012026925.1Genomic Context describing neighboring genes Neighboring gene sorting nexin-8-like Neighboring gene dipeptidase 1-like Neighboring gene uncharacterized LOC105454961 Neighboring gene Usher syndrome type-1G protein homolog Neighboring gene UPF0472 protein C16orf72 homolog

NW_012026798.1Genomic Context describing neighboring genes Neighboring gene PH domain leucine-rich repeat-containing protein phosphatase 2 Neighboring gene lysine--tRNA ligase Neighboring gene cysteine-rich secretory protein 1-like Neighboring gene protein PIH1D3 Neighboring gene OTU domain-containing protein 6B Neighboring gene protein retinal degeneration B Neighboring gene cytochrome c oxidase subunit 6A1, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Wasmannia auropunctata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference wasmannia.A_1.0

Genomic

  1. NW_012026798.1 Reference wasmannia.A_1.0

    Range
    1737734..1737806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference wasmannia.A_1.0

Genomic

  1. NW_012026925.1 Reference wasmannia.A_1.0

    Range
    442532..442604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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