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cchcr1 coiled-coil alpha-helical rod protein 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 105417484, updated on 13-Mar-2024

Summary

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Gene symbol
cchcr1
Gene description
coiled-coil alpha-helical rod protein 1
See related
Ensembl:ENSTRUG00000015419
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
19
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 15 NC_042299.1 (13034678..13042496, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 15 NC_018904.1 (9210275..9217842, complement)

Chromosome 15 - NC_042299.1Genomic Context describing neighboring genes Neighboring gene THO complex 2 Neighboring gene glutamate receptor 3 Neighboring gene neuroligin 3b Neighboring gene proteolipid protein 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil alpha-helical rod protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042299.1 Reference fTakRub1.2 Primary Assembly

    Range
    13034678..13042496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011611510.2 → XP_011609812.2  coiled-coil alpha-helical rod protein 1

    UniProtKB/TrEMBL
    H2UR38
    Related
    ENSTRUP00000039411.3, ENSTRUT00000039552.3
    Conserved Domains (1) summary
    pfam07111
    Location:175 → 757
    HCR; Alpha helical coiled-coil rod protein (HCR)
Nucleotide Protein
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