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NLGN1 neuroligin 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105305754, updated on 30-Mar-2024

Summary

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Gene symbol
NLGN1
Gene description
neuroligin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888793.1 (14824497..15820225)

NW_011888793.1Genomic Context describing neighboring genes Neighboring gene epithelial cell transforming 2 Neighboring gene spermatogenesis associated 16 Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene anaphase-promoting complex subunit 15 pseudogene Neighboring gene putative elongation factor 1-alpha-like 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888793 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in presynaptic membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic specialization membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuroligin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888793.1 Reference Pvam_2.0

    Range
    14824497..15820225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023524764.1 → XP_023380532.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  2. XM_023524785.1 → XP_023380553.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  3. XM_023524777.1 → XP_023380545.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  4. XM_023524772.1 → XP_023380540.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  5. XM_023524791.1 → XP_023380559.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  6. XM_023524801.1 → XP_023380569.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  7. XM_023524810.1 → XP_023380578.1  neuroligin-1 isoform X2

    UniProtKB/TrEMBL
    A0A6P6BZM8
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 606
    COesterase; Carboxylesterase family

  8. XM_023524796.1 → XP_023380564.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  9. XM_023524807.1 → XP_023380575.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6C055
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family
Nucleotide Protein
Heading Accession and Version

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