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MMP15 matrix metallopeptidase 15 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105305380, updated on 30-Mar-2024

Summary

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Gene symbol
MMP15
Gene description
matrix metallopeptidase 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889160.1 (1126960..1133805, complement)

NW_011889160.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111731498 Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene U6 snRNA biogenesis phosphodiesterase 1 Neighboring gene zinc finger protein 319

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889160 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrix metalloproteinase-15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889160.1 Reference Pvam_2.0

    Range
    1126960..1133805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011379969.2 → XP_011378271.1  matrix metalloproteinase-15

    UniProtKB/TrEMBL
    A0A6P3RR70
    Conserved Domains (4) summary
    cd00094
    Location:257 → 449
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    cd04278
    Location:26 → 194
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
    pfam00413
    Location:26 → 194
    Peptidase_M10; Matrixin
    pfam11857
    Location:495 → 566
    DUF3377; Domain of unknown function (DUF3377)
Nucleotide Protein
Heading Accession and Version

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