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CLDN6 claudin 6 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105303127, updated on 30-Mar-2024

Summary

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Gene symbol
CLDN6
Gene description
claudin 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889081.1 (2249278..2252967)

NW_011889081.1Genomic Context describing neighboring genes Neighboring gene host cell factor C1 regulator 1 Neighboring gene TNF receptor superfamily member 12A Neighboring gene claudin 9 Neighboring gene 41 kDa spicule matrix protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889081 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889081.1 Reference Pvam_2.0

    Range
    2249278..2252967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011376578.2 → XP_011374880.1  claudin-6

    See identical proteins and their annotated locations for XP_011374880.1

    UniProtKB/TrEMBL
    A0A6P3RJ70
    Conserved Domains (1) summary
    cl21598
    Location:5 → 170
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_011376579.2 → XP_011374881.1  claudin-6

    See identical proteins and their annotated locations for XP_011374881.1

    UniProtKB/TrEMBL
    A0A6P3RJ70
    Conserved Domains (1) summary
    cl21598
    Location:5 → 170
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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