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SEC61A2 SEC61 translocon subunit alpha 2 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105291703, updated on 30-Mar-2024

Summary

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Gene symbol
SEC61A2
Gene description
SEC61 translocon subunit alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888830.1 (2372434..2396063, complement)

NW_011888830.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 123 Neighboring gene 6.8 kDa mitochondrial proteolipid Neighboring gene nudix hydrolase 5 Neighboring gene 5S ribosomal RNA Neighboring gene dehydrogenase E1 and transketolase domain containing 1 Neighboring gene uncharacterized LOC111739294 Neighboring gene UPF2 regulator of nonsense mediated mRNA decay

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888830 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signal sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-translational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sec61 translocon complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec61 subunit alpha
Names
SEC61 translocon alpha 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888830.1 Reference Pvam_2.0

    Range
    2372434..2396063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023530337.1 → XP_023386105.1  protein transport protein Sec61 subunit alpha isoform X4

    UniProtKB/TrEMBL
    A0A6P6CFA5
    Conserved Domains (1) summary
    PTZ00219
    Location:15 → 410
    PTZ00219; Sec61 alpha subunit; Provisional

  2. XM_023530336.1 → XP_023386104.1  protein transport protein Sec61 subunit alpha isoform X4

    UniProtKB/TrEMBL
    A0A6P6CFA5
    Conserved Domains (1) summary
    PTZ00219
    Location:15 → 410
    PTZ00219; Sec61 alpha subunit; Provisional

  3. XM_011359617.2 → XP_011357919.1  protein transport protein Sec61 subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A6P3Q246
    Conserved Domains (1) summary
    PTZ00219
    Location:3 → 472
    PTZ00219; Sec61 alpha subunit; Provisional

  4. XM_011359618.2 → XP_011357920.1  protein transport protein Sec61 subunit alpha isoform X2

    See identical proteins and their annotated locations for XP_011357920.1

    UniProtKB/TrEMBL
    A0A6P3Q4I4
    Conserved Domains (1) summary
    PTZ00219
    Location:1 → 469
    PTZ00219; Sec61 alpha subunit; Provisional

  5. XM_023530335.1 → XP_023386103.1  protein transport protein Sec61 subunit alpha isoform X3

    UniProtKB/TrEMBL
    A0A6P6CFN7
    Conserved Domains (1) summary
    PTZ00219
    Location:1 → 468
    PTZ00219; Sec61 alpha subunit; Provisional
Nucleotide Protein
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