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C1QTNF2 C1q and TNF related 2 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105289896, updated on 30-Mar-2024

Summary

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Gene symbol
C1QTNF2
Gene description
C1q and TNF related 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See C1QTNF2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888811.1 (7306403..7326897)

NW_011888811.1Genomic Context describing neighboring genes Neighboring gene SLU7 homolog, splicing factor Neighboring gene family with sequence similarity 200 member C Neighboring gene cyclin J like Neighboring gene fatty acid binding protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888811 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement C1q tumor necrosis factor-related protein 2
Names
C1q and tumor necrosis factor related protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888811.1 Reference Pvam_2.0

    Range
    7306403..7326897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011356712.2 → XP_011355014.1  complement C1q tumor necrosis factor-related protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P3Q6K5
    Conserved Domains (2) summary
    pfam01391
    Location:191 → 245
    Collagen; Collagen triple helix repeat (20 copies)
    pfam00386
    Location:275 → 399
    C1q; C1q domain

  2. XM_011356714.2 → XP_011355016.1  complement C1q tumor necrosis factor-related protein 2 isoform X2

    See identical proteins and their annotated locations for XP_011355016.1

    UniProtKB/TrEMBL
    A0A3B0IPD0
    Conserved Domains (2) summary
    pfam01391
    Location:67 → 121
    Collagen; Collagen triple helix repeat (20 copies)
    pfam00386
    Location:151 → 275
    C1q; C1q domain
Nucleotide Protein
Heading Accession and Version

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