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ASCL1 achaete-scute family bHLH transcription factor 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 105235956, updated on 13-Mar-2024

Summary

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Gene symbol
ASCL1
Gene description
achaete-scute family bHLH transcription factor 1
Locus tag
PANDA_003504
See related
Ensembl:ENSAMEG00000024777
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 15 NC_048232.1 (71937054..71939878)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217384.1 (931211..939371)

Chromosome 15 - NC_048232.1Genomic Context describing neighboring genes Neighboring gene insulin like growth factor 1 Neighboring gene phenylalanine hydroxylase Neighboring gene chromosome 15 C12orf42 homolog Neighboring gene stabilin 2 Neighboring gene stabilin-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
achaete-scute homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048232.1 Reference ASM200744v2 Primary Assembly

    Range
    71937054..71939878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034644463.1 → XP_034500354.1  achaete-scute homolog 1

    UniProtKB/TrEMBL
    A0A7N5KFZ1
    Related
    ENSAMEP00000039632.1, ENSAMET00000048502.1
    Conserved Domains (1) summary
    cd19742
    Location:113 → 183
    bHLH_TS_ASCL1_Mash1; basic helix-loop-helix (bHLH) domain found in achaete-scute-like protein 1 (ASCL-1) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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