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LOC105217406 serine/arginine-rich splicing factor 7 [ Zeugodacus cucurbitae (melon fly) ]

Gene ID: 105217406, updated on 10-Apr-2024

Summary

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Gene symbol
LOC105217406
Gene description
serine/arginine-rich splicing factor 7
See related
EnsemblRapid:LOC105217406
Gene type
protein coding
RefSeq status
MODEL
Organism
Zeugodacus cucurbitae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Zeugodacus; Zeugodacus
Also known as
Srsf7
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current idZeuCucr1.2 (GCF_028554725.1) 3 NC_071668.1 (49518931..49525979, complement)
101 previous assembly ASM80634v1 (GCF_000806345.1) Unplaced Scaffold NW_011863817.1 (63025..70062)

Chromosome 3 - NC_071668.1Genomic Context describing neighboring genes Neighboring gene transcriptional regulator ATRX homolog Neighboring gene uncharacterized LOC105217408 Neighboring gene unextended protein Neighboring gene nucleolar protein 58 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene heterogeneous nuclear ribonucleoprotein 27C Neighboring gene wee1-like protein kinase Neighboring gene integrator complex subunit 3 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reconstructing a comprehensive transcriptome assembly of a white-pupal translocated strain of the pest fruit fly Bactrocera cucurbitae. Sim SB, et al. Gigascience, 2015. PMID 25830018, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028554725.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idZeuCucr1.2 Primary Assembly

Genomic

  1. NC_071668.1 Reference idZeuCucr1.2 Primary Assembly

    Range
    49518931..49525979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011192390.3 → XP_011190692.1  serine/arginine-rich splicing factor 7

    See identical proteins and their annotated locations for XP_011190692.1

    UniProtKB/TrEMBL
    A0A0A1WNB9
    Related
    XP_011190692.1, XM_011192390.3
    Conserved Domains (1) summary
    cd12373
    Location:13 → 85
    RRM_SRSF3_like; RNA recognition motif in serine/arginine-rich splicing factor 3 (SRSF3) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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