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Trnar-ucu transfer RNA arginine (anticodon UCU) [ Acromyrmex echinatior (Panamanian leafcutter ant) ]

Gene ID: 105142890, updated on 7-Sep-2022

Summary

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Gene symbol
Trnar-ucu
Gene description
transfer RNA arginine (anticodon UCU)
See related
EnsemblRapid:GeneID_105142890 EnsemblRapid:GeneID_105142890_2 EnsemblRapid:GeneID_105142890_3 EnsemblRapid:GeneID_105142890_4
Gene type
tRNA
RefSeq status
MODEL
Organism
Acromyrmex echinatior
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Acromyrmex
Summary
This record serves to anchor the annotations of this class of tRNAs at multiple locations on the Panamanian leafcutter ant genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, Pub
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Genomic context

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Location:
chromosome: Un
Annotation release Status Assembly Chr Location
100 current Aech_3.9 (GCF_000204515.1) Unplaced Scaffold NW_011626582.1 (2863..2936, complement)
100 current Aech_3.9 (GCF_000204515.1) Unplaced Scaffold NW_011626583.1 (2853..2926, complement)
100 current Aech_3.9 (GCF_000204515.1) Unplaced Scaffold NW_011627660.1 (67648..67720, complement)
100 current Aech_3.9 (GCF_000204515.1) Unplaced Scaffold NW_011627681.1 (414449..414521, complement)

NW_011627681.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105153233 Neighboring gene mitochondrial import inner membrane translocase subunit TIM50-C-like Neighboring gene hypothetical protein Neighboring gene calpain-D-like Neighboring gene protein msta

NW_011627660.1Genomic Context describing neighboring genes Neighboring gene synaptotagmin-14 Neighboring gene probable cardiolipin synthase Neighboring gene probable complex I intermediate-associated protein 30, mitochondrial Neighboring gene uncharacterized LOC105153122 Neighboring gene homeobox protein Hox-B4 Neighboring gene uncharacterized LOC105153124

NW_011626583.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105147427 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial-like Neighboring gene chaperone protein ClpB2, chloroplastic-like

NW_011626582.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105147401 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial-like Neighboring gene chaperone protein ClpB2, chloroplastic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acromyrmex echinatior Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aech_3.9

Genomic

  1. NW_011626582.1 Reference Aech_3.9

    Range
    2863..2936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference Aech_3.9

Genomic

  1. NW_011626583.1 Reference Aech_3.9

    Range
    2853..2926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference Aech_3.9

Genomic

  1. NW_011627660.1 Reference Aech_3.9

    Range
    67648..67720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference Aech_3.9

Genomic

  1. NW_011627681.1 Reference Aech_3.9

    Range
    414449..414521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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