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CAPN8 calpain 8 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105099844, updated on 18-Apr-2024

Summary

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Gene symbol
CAPN8
Gene description
calpain 8
Locus tag
Cadr_000023200
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Also known as
Calpain-8
Orthologs
human mouse all
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Genomic context

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See CAPN8 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 21 NC_087456.1 (22720874..22776089)
101 previous assembly CamDro3 (GCF_000803125.2) 23 NC_044533.1 (15854377..15908743, complement)

Chromosome 21 - NC_087456.1Genomic Context describing neighboring genes Neighboring gene tumor protein p53 binding protein 2 Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene uncharacterized LOC135318798 Neighboring gene calpain 2 Neighboring gene coiled-coil domain containing 185 Neighboring gene sushi domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087456.1 Reference mCamDro1.pat

    Range
    22720874..22776089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010992741.3 → XP_010991043.2  calpain-8

    Conserved Domains (3) summary
    cd00214
    Location:354 → 514
    Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
    cd16191
    Location:536 → 703
    EFh_PEF_CAPN8; Penta-EF hand, calcium binding motifs, found in calpain-8 (CAPN8)
    pfam00648
    Location:46 → 342
    Peptidase_C2; Calpain family cysteine protease
Nucleotide Protein
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