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NXF1 nuclear RNA export factor 1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105091509, updated on 18-Apr-2024

Summary

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Gene symbol
NXF1
Gene description
nuclear RNA export factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 12 NC_087447.1 (8586968..8598103)
101 previous assembly CamDro3 (GCF_000803125.2) 10 NC_044520.1 (3361741..3372871)

Chromosome 12 - NC_087447.1Genomic Context describing neighboring genes Neighboring gene testis expressed 54 Neighboring gene syntaxin 5 Neighboring gene uncharacterized LOC135322638 Neighboring gene transmembrane protein 223 Neighboring gene transmembrane protein 179B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear RNA export factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087447.1 Reference mCamDro1.pat

    Range
    8586968..8598103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031459418.2 → XP_031315278.1  nuclear RNA export factor 1

    Conserved Domains (6) summary
    smart00804
    Location:555 → 617
    TAP_C; C-terminal domain of vertebrate Tap protein
    cd00780
    Location:381 → 537
    NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
    sd00035
    Location:223 → 265
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam09162
    Location:115 → 197
    Tap-RNA_bind; Tap, RNA-binding
    pfam12799
    Location:290 → 332
    LRR_4; Leucine Rich repeats (2 copies)
    cl39015
    Location:205 → 351
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

RNA

  1. XR_010383318.1 RNA Sequence

Nucleotide Protein
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