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GPBP1L1 GC-rich promoter binding protein 1 like 1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105090864, updated on 19-Apr-2024

Summary

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Gene symbol
GPBP1L1
Gene description
GC-rich promoter binding protein 1 like 1
Locus tag
Cadr_000013839
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 14 NC_087449.1 (38188112..38236585)
101 previous assembly CamDro3 (GCF_000803125.2) 13 NC_044523.1 (34425888..34474575, complement)

Chromosome 14 - NC_087449.1Genomic Context describing neighboring genes Neighboring gene intracisternal A particle-promoted polypeptide Neighboring gene transmembrane protein 69 Neighboring gene coiled-coil domain containing 17 Neighboring gene nuclear autoantigenic sperm protein Neighboring gene uncharacterized LOC135322880 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasculin-like protein 1
Names
Vasculin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087449.1 Reference mCamDro1.pat

    Range
    38188112..38236585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010982243.3 → XP_010980545.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_010980545.1

    UniProtKB/TrEMBL
    A0A5N4DD53
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 470
    Vasculin; Vascular protein family Vasculin-like 1

  2. XM_031465036.2 → XP_031320896.1  vasculin-like protein 1

    UniProtKB/TrEMBL
    A0A5N4DD53
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 470
    Vasculin; Vascular protein family Vasculin-like 1

  3. XM_010982242.3 → XP_010980544.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_010980544.1

    UniProtKB/TrEMBL
    A0A5N4DD53
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 470
    Vasculin; Vascular protein family Vasculin-like 1

  4. XM_010982240.3 → XP_010980542.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_010980542.1

    UniProtKB/TrEMBL
    A0A5N4DD53
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 470
    Vasculin; Vascular protein family Vasculin-like 1

  5. XM_010982241.3 → XP_010980543.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_010980543.1

    UniProtKB/TrEMBL
    A0A5N4DD53
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 470
    Vasculin; Vascular protein family Vasculin-like 1

  6. XM_010982239.3 → XP_010980541.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_010980541.1

    UniProtKB/TrEMBL
    A0A5N4DD53
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 470
    Vasculin; Vascular protein family Vasculin-like 1
Nucleotide Protein
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