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ATF1 activating transcription factor 1 [ Camelus bactrianus (Bactrian camel) ]

Gene ID: 105076229, updated on 13-Mar-2024

Summary

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Gene symbol
ATF1
Gene description
activating transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus bactrianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Ca_bactrianus_MBC_1.0 (GCF_000767855.1) Unplaced Scaffold NW_011516006.1 (4897326..4947891)

NW_011516006.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S4, X isoform-like Neighboring gene disco interacting protein 2 homolog B Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene transmembrane serine protease 12 Neighboring gene thiol methyltransferase 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011516006 Unplaced Scaffold Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ATF4-CREB1 transcription factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus bactrianus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ca_bactrianus_MBC_1.0 Primary Assembly

Genomic

  1. NW_011516006.1 Reference Ca_bactrianus_MBC_1.0 Primary Assembly

    Range
    4897326..4947891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010964282.2 → XP_010962584.1  cyclic AMP-dependent transcription factor ATF-1

    See identical proteins and their annotated locations for XP_010962584.1

    UniProtKB/TrEMBL
    A0A9W3F2I0
    Conserved Domains (2) summary
    cd14690
    Location:254 → 308
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:88 → 122
    pKID; pKID domain
Nucleotide Protein
Heading Accession and Version

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