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lrriq1 leucine-rich repeats and IQ motif containing 1 [ Esox lucius (northern pike) ]

Gene ID: 105026419, updated on 13-Mar-2024

Summary

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Gene symbol
lrriq1
Gene description
leucine-rich repeats and IQ motif containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 19
Exon count:
24
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 19 NC_047587.1 (10579424..10616184, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG19 NC_025986.4 (10783915..10823035, complement)

Chromosome 19 - NC_047587.1Genomic Context describing neighboring genes Neighboring gene Ras association domain family member 9 Neighboring gene ALX homeobox 1 Neighboring gene solute carrier family 6 member 15 Neighboring gene leucine-rich repeat kinase 2 Neighboring gene solute carrier family 2 member 13b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and IQ domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047587.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    10579424..10616184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034288175.1 → XP_034144066.1  leucine-rich repeat and IQ domain-containing protein 1

    Conserved Domains (4) summary
    PTZ00121
    Location:13 → 351
    PTZ00121; MAEBL; Provisional
    sd00031
    Location:447 → 468
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:469 → 490
    LRR_RI; leucine-rich repeat [structural motif]
    cd21340
    Location:468 → 725
    PPP1R42; protein phosphatase 1 regulatory subunit 42
Nucleotide Protein
Heading Accession and Version

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