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LOC105015690 RAS guanyl-releasing protein 1 [ Esox lucius (northern pike) ]

Gene ID: 105015690, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105015690
Gene description
RAS guanyl-releasing protein 1
See related
EnsemblRapid:ENSELUG00000006356
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
rasgrp1
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Genomic context

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Location:
chromosome: 15
Exon count:
17
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 15 NC_047583.1 (14065057..14082628)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG15 NC_025982.4 (14243100..14260770)

Chromosome 15 - NC_047583.1Genomic Context describing neighboring genes Neighboring gene delta-like protein 4 Neighboring gene exonuclease 3'-5' domain containing 1 Neighboring gene synapse differentiation-inducing gene protein 1-like Neighboring gene visual system homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAS guanyl-releasing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047583.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    14065057..14082628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010879022.4 → XP_010877324.1  RAS guanyl-releasing protein 1

    UniProtKB/TrEMBL
    A0A3P8ZLS8
    Related
    ENSELUP00000086703.1, ENSELUT00000095760.1
    Conserved Domains (5) summary
    cd06224
    Location:99 → 199
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    smart00147
    Location:237 → 473
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd00029
    Location:578 → 627
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    pfam08347
    Location:635 → 729
    CTNNB1_binding; N-terminal CTNNB1 binding
    pfam13499
    Location:514 → 562
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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