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pum2 pumilio RNA-binding family member 2 [ Esox lucius (northern pike) ]

Gene ID: 105015355, updated on 13-Mar-2024

Summary

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Gene symbol
pum2
Gene description
pumilio RNA-binding family member 2
See related
EnsemblRapid:ENSELUG00000014997
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 14
Exon count:
24
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 14 NC_047582.1 (32825183..32840388)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG14 NC_025981.4 (4532962..4552716, complement)

Chromosome 14 - NC_047582.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein B-100 Neighboring gene rho-related GTP-binding protein RhoB Neighboring gene syndecan-4-like Neighboring gene lysosomal protein transmembrane 4 alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pumilio homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047582.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    32825183..32840388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010878454.5 → XP_010876756.2  pumilio homolog 2 isoform X5

    UniProtKB/TrEMBL
    A0A3P9A3V0
    Conserved Domains (1) summary
    cd07920
    Location:854 → 1177
    Pumilio; Pumilio-family RNA binding domain

  2. XM_010878449.5 → XP_010876751.2  pumilio homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A3P8YGF9
    Conserved Domains (1) summary
    cd07920
    Location:854 → 1199
    Pumilio; Pumilio-family RNA binding domain

  3. XM_010878455.5 → XP_010876757.2  pumilio homolog 2 isoform X6

    UniProtKB/TrEMBL
    A0A3P9A3V0
    Related
    ENSELUP00000035850.3, ENSELUT00000023953.3
    Conserved Domains (1) summary
    cd07920
    Location:854 → 1175
    Pumilio; Pumilio-family RNA binding domain

  4. XM_010878447.5 → XP_010876749.2  pumilio homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A3P8YGF9
    Conserved Domains (1) summary
    cd07920
    Location:854 → 1201
    Pumilio; Pumilio-family RNA binding domain

  5. XM_010878453.5 → XP_010876755.2  pumilio homolog 2 isoform X4

    UniProtKB/TrEMBL
    A0A3P8YGF9
    Related
    ENSELUP00000015005.3, ENSELUT00000023973.3
    Conserved Domains (1) summary
    cd07920
    Location:846 → 1193
    Pumilio; Pumilio-family RNA binding domain

  6. XM_010878450.5 → XP_010876752.2  pumilio homolog 2 isoform X3

    UniProtKB/TrEMBL
    A0A3P8YGF9
    Conserved Domains (1) summary
    cd07920
    Location:851 → 1198
    Pumilio; Pumilio-family RNA binding domain

  7. XM_010878448.5 → XP_010876750.2  pumilio homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A3P8YGF9
    Conserved Domains (1) summary
    cd07920
    Location:854 → 1201
    Pumilio; Pumilio-family RNA binding domain
Nucleotide Protein
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