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gda guanine deaminase [ Esox lucius (northern pike) ]

Gene ID: 105014487, updated on 13-Mar-2024

Summary

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Gene symbol
gda
Gene description
guanine deaminase
See related
EnsemblRapid:ENSELUG00000002255
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
14
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 13 NC_047581.1 (27934005..27948451, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG13 NC_025980.4 (11952218..11966818)

Chromosome 13 - NC_047581.1Genomic Context describing neighboring genes Neighboring gene zinc finger, AN1-type domain 5a Neighboring gene uncharacterized LOC105014488 Neighboring gene chromosome 13 C9orf85 homolog Neighboring gene abhydrolase domain containing 17B, depalmitoylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in guanine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine deaminase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047581.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    27934005..27948451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010876869.5 → XP_010875171.1  guanine deaminase

    UniProtKB/TrEMBL
    A0A3P8ZDA6
    Related
    ENSELUP00000026418.3, ENSELUT00000018642.3
    Conserved Domains (2) summary
    PRK09228
    Location:13 → 446
    PRK09228; guanine deaminase; Provisional
    cl00281
    Location:15 → 443
    metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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