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NUP35 nucleoporin 35 [ Bison bison bison ]

Gene ID: 105002898, updated on 13-Mar-2024

Summary

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Gene symbol
NUP35
Gene description
nucleoporin 35
See related
Ensembl:ENSBBBG00000018806
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495021.1 (5279293..5311265, complement)

NW_011495021.1Genomic Context describing neighboring genes Neighboring gene ras-related GTP-binding protein A-like Neighboring gene zinc finger protein 804A Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit P pseudogene Neighboring gene dual specificity phosphatase 19 Neighboring gene NCK associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495021.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear pore organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore central transport channel IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore nuclear basket IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoporin NUP53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495021.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    5279293..5311265 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010859738.1 → XP_010858040.1  nucleoporin NUP53

    UniProtKB/TrEMBL
    A0A6P3J3W3
    Related
    ENSBBBP00000010725.1, ENSBBBT00000019498.1
    Conserved Domains (2) summary
    cd12722
    Location:173 → 246
    RRM_Nup53; RNA recognition motif in nucleoporin Nup53
    cl00779
    Location:132 → 212
    NQR2_RnfD_RnfE; NQR2, RnfD, RnfE family
Nucleotide Protein
Heading Accession and Version

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