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HOPX HOP homeobox [ Bison bison bison ]

Gene ID: 105002822, updated on 13-Mar-2024

Summary

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Gene symbol
HOPX
Gene description
HOP homeobox
See related
Ensembl:ENSBBBG00000007279
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495020.1 (4630927..4662875)

NW_011495020.1Genomic Context describing neighboring genes Neighboring gene RE1-silencing transcription factor-like Neighboring gene serine peptidase inhibitor Kazal type 2 Neighboring gene 40S ribosomal protein S11-like Neighboring gene sperm microtubule associated protein 2 like Neighboring gene 40S ribosomal protein S11-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495020.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeodomain-only protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495020.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    4630927..4662875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010859645.1 → XP_010857947.1  homeodomain-only protein

    See identical proteins and their annotated locations for XP_010857947.1

    UniProtKB/TrEMBL
    A0A6P3IUH5
    Conserved Domains (1) summary
    cd00086
    Location:10 → 62
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  2. XM_010859646.1 → XP_010857948.1  homeodomain-only protein

    See identical proteins and their annotated locations for XP_010857948.1

    UniProtKB/TrEMBL
    A0A6P3IUH5
    Related
    ENSBBBP00000012254.1, ENSBBBT00000021784.1
    Conserved Domains (1) summary
    cd00086
    Location:10 → 62
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
Heading Accession and Version

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