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PPRC1 PPARG related coactivator 1 [ Bison bison bison ]

Gene ID: 105002682, updated on 13-Mar-2024

Summary

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Gene symbol
PPRC1
Gene description
PPARG related coactivator 1
See related
Ensembl:ENSBBBG00000007281
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495018.1 (28246909..28273946, complement)

NW_011495018.1Genomic Context describing neighboring genes Neighboring gene vacuolar-sorting protein SNF8 pseudogene Neighboring gene nucleolar and coiled-body phosphoprotein 1 Neighboring gene LIM domain binding 1 Neighboring gene 60S ribosomal protein L32 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495018.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Names
peroxisome proliferator-activated receptor gamma, coactivator-related 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495018.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    28246909..28273946 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010859458.1 → XP_010857760.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A6P3J345
    Conserved Domains (1) summary
    cd12624
    Location:1419 → 1509
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  2. XM_010859452.1 → XP_010857754.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A6P3IZA4
    Conserved Domains (1) summary
    cd12624
    Location:1595 → 1685
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  3. XM_010859457.1 → XP_010857759.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A6P3IZA8
    Conserved Domains (1) summary
    cd12624
    Location:1373 → 1463
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  4. XM_010859450.1 → XP_010857752.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P3J267
    Conserved Domains (1) summary
    cd12624
    Location:1637 → 1727
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  5. XM_010859449.1 → XP_010857751.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P3IU07
    Conserved Domains (1) summary
    cd12624
    Location:1638 → 1728
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  6. XM_010859454.1 → XP_010857756.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X5

    See identical proteins and their annotated locations for XP_010857756.1

    UniProtKB/TrEMBL
    A0A6P3IU10
    Conserved Domains (1) summary
    cd12624
    Location:1501 → 1591
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  7. XM_010859455.1 → XP_010857757.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X5

    See identical proteins and their annotated locations for XP_010857757.1

    UniProtKB/TrEMBL
    A0A6P3IU10
    Conserved Domains (1) summary
    cd12624
    Location:1501 → 1591
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  8. XM_010859459.1 → XP_010857761.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A6P3IU17
    Related
    ENSBBBP00000014379.1, ENSBBBT00000032143.1
    Conserved Domains (1) summary
    cd12624
    Location:1274 → 1364
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  9. XM_010859453.1 → XP_010857755.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P3J341
    Related
    ENSBBBP00000014377.1, ENSBBBT00000024884.1
    Conserved Domains (1) summary
    cd12624
    Location:1539 → 1629
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins

  10. XM_010859456.1 → XP_010857758.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A6P3ITX4
    Conserved Domains (1) summary
    cd12624
    Location:1495 → 1585
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
Nucleotide Protein
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