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GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 [ Bison bison bison ]

Gene ID: 105001527, updated on 13-Mar-2024

Summary

Gene symbol
GALNT6
Gene description
polypeptide N-acetylgalactosaminyltransferase 6
See related
Ensembl:ENSBBBG00000021353
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
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Genomic context

See GALNT6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494955.1 (5133500..5167988, complement)

NW_011494955.1Genomic Context describing neighboring genes Neighboring gene bridging integrator 2 Neighboring gene chymotrypsin like elastase 1 Neighboring gene uncharacterized LOC105001529 Neighboring gene solute carrier family 4 member 8 Neighboring gene 60S ribosomal protein L36 pseudogene

Genomic regions, transcripts, and products

Genomic Sequence:
NW_011494955.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

General protein information

Preferred Names
polypeptide N-acetylgalactosaminyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494955.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    5133500..5167988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010857849.1XP_010856151.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_010856151.1

    UniProtKB/TrEMBL
    A0A6P3IVE7
    Conserved Domains (4) summary
    cd02510
    Location:180485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:180469
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:499621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:497619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
  2. XM_010857848.1XP_010856150.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_010856150.1

    UniProtKB/TrEMBL
    A0A6P3IVE7
    Related
    ENSBBBP00000025876.1, ENSBBBT00000023845.1
    Conserved Domains (4) summary
    cd02510
    Location:180485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:180469
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:499621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:497619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
  3. XM_010857847.1XP_010856149.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_010856149.1

    UniProtKB/TrEMBL
    A0A6P3IVE7
    Conserved Domains (4) summary
    cd02510
    Location:180485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:180469
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:499621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:497619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
  4. XM_010857850.1XP_010856152.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P3IXF9
    Conserved Domains (3) summary
    cd02510
    Location:180485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:180469
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:499538
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...