Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    CEBPA CCAAT/enhancer binding protein (C/EBP), alpha [ Homo sapiens (human) ]

    Gene ID: 1050, updated on 10-Jun-2013
    Official Symbol
    CEBPAprovided by HGNC
    Official Full Name
    CCAAT/enhancer binding protein (C/EBP), alphaprovided by HGNC
    Primary source
    HGNC:1833
    See related
    Ensembl:ENSG00000245848; HPRD:00296; MIM:116897; Vega:OTTHUMG00000161461
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CEBP; C/EBP-alpha
    Summary
    The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain promoters and enhancers. It can also form heterodimers with the related proteins CEBP-beta and CEBP-gamma. The encoded protein has been shown to bind to the promoter and modulate the expression of the gene encoding leptin, a protein that plays an important role in body weight homeostasis. Also, the encoded protein can interact with CDK2 and CDK4, thereby inhibiting these kinases and causing growth arrest in cultured cells. [provided by RefSeq, Jul 2008]
    Location :
    19q13.1
    Sequence :
    Chromosome: 19; NC_000019.9 (33790840..33793430, complement)
    See CEBPA in Epigenomics, MapViewer

    Chromosome 19 - NC_000019.9Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine 4 (anticodon AGU) Neighboring gene low density lipoprotein receptor-related protein 3 Neighboring gene solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 Neighboring gene CEBPA antisense RNA 1 (head to head) Neighboring gene ribosomal protein S3a pseudogene 50

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    AML - Acute myeloid leukemia

    Summary from GeneReviews: Familial Acute Myeloid Leukemia (AML) with Mutated CEBPA Go to GeneReviews

    Disease Characteristics
    Familial acute myeloid leukemia (AML) with mutated CEBPA is defined as AML in which a germline CEBPA mutation is present in a family in which multiple individuals have AML. In contrast, sporadic AML with mutated CEBPA is defined as AML in which a CEBPA mutation is identified in somatic (i.e., leukemic) cells but not in germline (i.e., non-leukemic) cells. Too few persons with familial AML with mutated CEBPA have been reported to be certain about the natural history of the disease. The age of onset of familial AML with mutated CEBPA appears to be earlier than sporadic AML; disease onset has been reported in persons as young as age four years and older than age 50 years. The prognosis of individuals with familial AML with mutated CEBPA appears to be favorable (~50%-65% overall survival) compared to the ~25%-40% overall survival of those who have normal karyotype AML but no germline CEPBA mutation. Individuals with familial AML with mutated CEBPA who have been cured of their initial disease may be at greater risk of developing additional malignant clones than persons with sporadic disease.
    Diagnosis Testing
    CEBPA mutations are found in the leukemic cells of approximately 9% of persons with AML, including 15%-18% of persons with normal-karyotype AML; however, few of these individuals have a germline mutation. Detection of a germline CEBPA mutation in a specimen that contains only non-leukemic cells from an individual with AML or detection of a germline CEBPA mutation in a member of a pedigree in which more than one family member has had AML or myelodysplastic syndrome (MDS) establishes the diagnosis of familial AML with mutated CEBPA.
    Genetic Counseling
    Familial AML with mutated CEBPA is inherited in an autosomal dominant manner. The proportion of cases caused by a de novo germline mutation is unknown; currently, all seven reported affected individuals have had an affected parent. Each child of an affected individual has a 50% chance of inheriting the germline mutation. If the disease-causing mutation has been identified in an affected family member, prenatal testing for at-risk pregnancies is possible through laboratories offering either prenatal testing for the gene of interest or custom testing. Requests for prenatal testing for conditions that do not affect intellect and have treatment available are not common.
    References
    Protein Gene Interaction Pubs
    Tat, p14 tat Specific C/EBP and NF-kappaB transcription factor binding elements within the IL-1beta promoter are involved in Tat regulation of IL-1beta production PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Products Interactant Other Gene Complex Source Pubs Description
    NP_004355.2 NC_000003.9 LTF    BIND  PubMed C/EBP-alpha interacts with the lactoferrin promoter. 
    NP_004355.2 NP_054790.2 NCOA6    BIND  PubMed ASC-2 interacts with C/EBP alpha. 
    NP_004355.2 AAC36702.1 PIAS1    BIND  PubMed C/EBP-alpha interacts with PIAS1. 
    P49715 P15336 ATF2    HPRD  PubMed  
    P49715 P24941 CDK2    HPRD  PubMed  
    P49715 P11802 CDK4    HPRD  PubMed  
    P49715 P38936 CDKN1A    HPRD  PubMed  
    P49715 Q16667 CDKN3    HPRD  PubMed  
    P49715 P47902 CDX1    HPRD  PubMed  
    P49715 P49715 CEBPA    HPRD  PubMed  
    P49715 P17676 CEBPB    HPRD  PubMed  
    P49715 P49716 CEBPD    HPRD  PubMed  
    P49715 Q92793 CREBBP    HPRD  PubMed  
    P49715 P35222 CTNNB1    HPRD  PubMed  
    P49715 Q10586 DBP    HPRD  PubMed  
    P49715 Q09472 EP300    HPRD  PubMed  
    P49715 P23769 GATA2    HPRD  PubMed  
    P49715 P49841 GSK3B    HPRD  PubMed  
    P49715 P20823 HNF1A    HPRD  PubMed  
    P49715 P35548 MSX2    HPRD  PubMed  
    P49715 P01106 MYC    HPRD  PubMed  
    P49715 Q14686 NCOA6    HPRD  PubMed  
    P49715 P23511 NFYA    HPRD  PubMed  
    P49715 P04150 NR3C1    HPRD  PubMed  
    P49715 O75925 PIAS1    HPRD  PubMed  
    P49715 P06400 RB1    HPRD  PubMed  
    P49715 P28749 RBL1    HPRD  PubMed  
    P49715 P35251 RFC1    HPRD  PubMed  
    P49715 Q01196 RUNX1    HPRD  PubMed  
    P49715 P56693 SOX10    HPRD  PubMed  
    P49715 P57073 SOX8    HPRD  PubMed  
    P49715 P17947 SPI1    HPRD  PubMed  
    P49715 P55854 SUMO3    HPRD  PubMed  
    BioGRID:107479 BioGRID:106602 ACTN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:117670 AK5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:115445 AKAP9    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:106862 AR    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:128104 ASXL1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:107776 ATF2    BioGRID  PubMed Two-hybrid 
    BioGRID:107479 BioGRID:249547 Atf2    BioGRID  PubMed Co-purification; Far Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:107169 C1QBP    BioGRID  PubMed Two-hybrid 
    BioGRID:107479 BioGRID:107274 CAPN2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:107452 CDK2    BioGRID  PubMed Affinity Capture-Western; Co-fractionation; Reconstituted Complex 
    BioGRID:107479 BioGRID:107454 CDK4    BioGRID  PubMed Affinity Capture-Western; Co-fractionation; Reconstituted Complex 
    BioGRID:107479 BioGRID:107460 CDKN1A    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:107479 BioGRID:107479 CEBPA    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:107480 CEBPB    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:107530 CHD1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:107880 CTNNB1    BioGRID  PubMed Affinity Capture-Western; Phenotypic Enhancement 
    BioGRID:107479 BioGRID:108206 E2F4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:114260 EDF1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:108309 ELAVL1    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:107479 BioGRID:108347 EP300    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:107479 BioGRID:108403 ESR1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:108431 EWSR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:108799 FUT1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:206088 Fbxw7    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:108938 GFAP    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:125508 GRIN3A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:109315 HDAC1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:109316 HDAC2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:109424 HNRNPC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:109928 JUN    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:115779 KAT5    BioGRID  PubMed Affinity Capture-Luminescence; Affinity Capture-MS; Affinity Capture-Western; Co-localization 
    BioGRID:107479 BioGRID:117048 MACF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:110269 MAF    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:111585 MAPK8    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:107479 BioGRID:110319 MAX    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:110342 MCM5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:110478 MNT    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:110495 MPP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:119337 MRTO4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:110594 MSX2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:114562 MTA1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:110694 MYC    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:122746 NAA16    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:113841 NCOA3    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:107479 BioGRID:116691 NCOA6    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:110849 NFATC4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:109165 NR3C1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:106652 PARP1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:111244 PGAM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:114124 PIAS1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:111572 PKN2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:122173 POLR1E    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:123784 RAB34    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:111839 RANBP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:111850 RARB    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:111858 RASGRF1    BioGRID  PubMed Two-hybrid 
    BioGRID:107479 BioGRID:111860 RB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:121364 RPGRIP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:112319 SFPQ    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:112393 SKP2    BioGRID  PubMed Two-hybrid 
    BioGRID:107479 BioGRID:113990 SLC25A11    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:110263 SMAD3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:110264 SMAD4    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107479 BioGRID:112479 SMARCA2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:112481 SMARCA4    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:113871 SMC1A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:109657 SP110    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:112566 SPI1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:112589 SPTBN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:115329 SRA1    BioGRID  PubMed Far Western 
    BioGRID:107479 BioGRID:112497 SUMO2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:112795 TCF7L2    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:107479 BioGRID:112900 TGFB2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:112332 TRA2B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107479 BioGRID:113185 UBE3A    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:113264 VDR    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107479 BioGRID:112804 VPS72    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:113353 XRCC5    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:108822 XRCC6    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107479 BioGRID:115175 ZEB2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107479 BioGRID:113421 ZNF45    BioGRID  PubMed Affinity Capture-MS 

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    DNA binding TAS
    Traceable Author Statement
    more info
    PubMed 
    HMG box domain binding IEA
    Inferred from Electronic Annotation
    more info
     
    RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    sequence-specific DNA binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transcription factor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    transcription regulatory region DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    acute-phase response IEA
    Inferred from Electronic Annotation
    more info
     
    brown fat cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    cell maturation IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to lithium ion IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to organic cyclic compound IEA
    Inferred from Electronic Annotation
    more info
     
    cholesterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    cytokine-mediated signaling pathway NAS
    Non-traceable Author Statement
    more info
    PubMed 
    embryonic placenta development IEA
    Inferred from Electronic Annotation
    more info
     
    generation of precursor metabolites and energy TAS
    Traceable Author Statement
    more info
    PubMed 
    inner ear development IEA
    Inferred from Electronic Annotation
    more info
     
    liver development IEA
    Inferred from Electronic Annotation
    more info
     
    lung development IEA
    Inferred from Electronic Annotation
    more info
     
    macrophage differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion organization IEA
    Inferred from Electronic Annotation
    more info
     
    myeloid cell differentiation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    negative regulation of cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of transcription from RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
     
    organ regeneration IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of fat cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of osteoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of transcription from RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of transcription from RNA polymerase III promoter IDA
    Inferred from Direct Assay
    more info
    PubMed 
    response to glucocorticoid stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    response to vitamin B2 IEA
    Inferred from Electronic Annotation
    more info
     
    transcription from RNA polymerase II promoter TAS
    Traceable Author Statement
    more info
    PubMed 
    transcription, DNA-dependent IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transcription, DNA-dependent NAS
    Non-traceable Author Statement
    more info
    PubMed 
    urea cycle IEA
    Inferred from Electronic Annotation
    more info
     
    virus-host interaction IEA
    Inferred from Electronic Annotation
    more info
     
    white fat cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Rb-E2F complex IEA
    Inferred from Electronic Annotation
    more info
     
    nuclear matrix IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Preferred Names
    CCAAT/enhancer-binding protein alpha
    Names
    CCAAT/enhancer-binding protein alpha

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_012022.1 RefSeqGene

      Range
      5001..7591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics), LRG_456

    mRNA and Protein(s)

    1. NM_004364.3NP_004355.2  CCAAT/enhancer-binding protein alpha

      Status: REVIEWED

      Source sequence(s)
      AC008738, BC027902
      Consensus CDS
      CCDS54243.1
      UniProtKB/Swiss-Prot
      P49715
      Related
      ENSP00000427514, OTTHUMP00000220269, ENST00000498907, OTTHUMT00000365012
      Conserved Domains (1) summary
      pfam07716
      Location:281334
      Blast Score: 158
      bZIP_2; Basic region leucine zipper

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000019.9 Reference GRCh37.p10 Primary Assembly

      Range
      33790840..33793430, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000151.1 Alternate HuRef

      Range
      30291676..30294205, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018930.1 Alternate CHM1_1.0

      Range
      33948151..33950741, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

      Recent activity

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...