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ZNF84 zinc finger protein 84 [ Bison bison bison ]

Gene ID: 104997616, updated on 12-Mar-2024

Summary

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Gene symbol
ZNF84
Gene description
zinc finger protein 84
See related
Ensembl:ENSBBBG00000017294
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494884.1 (2790979..2818447, complement)

NW_011494884.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 891 Neighboring gene zinc finger protein 10 Neighboring gene zinc finger protein 140 Neighboring gene zinc finger protein 26 Neighboring gene zinc finger protein 605

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494884.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 84

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494884.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    2790979..2818447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010852481.1 → XP_010850783.1  zinc finger protein 84 isoform X1

    See identical proteins and their annotated locations for XP_010850783.1

    UniProtKB/TrEMBL
    A0A6P3IIK2
    Conserved Domains (6) summary
    smart00349
    Location:9 → 68
    KRAB; krueppel associated box
    COG5048
    Location:315 → 722
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:182 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:9 → 47
    KRAB; KRAB box
    pfam13465
    Location:331 → 356
    zf-H2C2_2; Zinc-finger double domain

  2. XM_010852479.1 → XP_010850781.1  zinc finger protein 84 isoform X1

    See identical proteins and their annotated locations for XP_010850781.1

    UniProtKB/TrEMBL
    A0A6P3IIK2
    Conserved Domains (6) summary
    smart00349
    Location:9 → 68
    KRAB; krueppel associated box
    COG5048
    Location:315 → 722
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:182 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:9 → 47
    KRAB; KRAB box
    pfam13465
    Location:331 → 356
    zf-H2C2_2; Zinc-finger double domain

  3. XM_010852477.1 → XP_010850779.1  zinc finger protein 84 isoform X1

    See identical proteins and their annotated locations for XP_010850779.1

    UniProtKB/TrEMBL
    A0A6P3IIK2
    Conserved Domains (6) summary
    smart00349
    Location:9 → 68
    KRAB; krueppel associated box
    COG5048
    Location:315 → 722
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:182 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:9 → 47
    KRAB; KRAB box
    pfam13465
    Location:331 → 356
    zf-H2C2_2; Zinc-finger double domain

  4. XM_010852480.1 → XP_010850782.1  zinc finger protein 84 isoform X1

    See identical proteins and their annotated locations for XP_010850782.1

    UniProtKB/TrEMBL
    A0A6P3IIK2
    Conserved Domains (6) summary
    smart00349
    Location:9 → 68
    KRAB; krueppel associated box
    COG5048
    Location:315 → 722
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:182 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:9 → 47
    KRAB; KRAB box
    pfam13465
    Location:331 → 356
    zf-H2C2_2; Zinc-finger double domain

  5. XM_010852478.1 → XP_010850780.1  zinc finger protein 84 isoform X1

    See identical proteins and their annotated locations for XP_010850780.1

    UniProtKB/TrEMBL
    A0A6P3IIK2
    Conserved Domains (6) summary
    smart00349
    Location:9 → 68
    KRAB; krueppel associated box
    COG5048
    Location:315 → 722
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:182 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:9 → 47
    KRAB; KRAB box
    pfam13465
    Location:331 → 356
    zf-H2C2_2; Zinc-finger double domain

  6. XM_010852483.1 → XP_010850785.1  zinc finger protein 84 isoform X1

    See identical proteins and their annotated locations for XP_010850785.1

    UniProtKB/TrEMBL
    A0A6P3IIK2
    Related
    ENSBBBP00000009194.1, ENSBBBT00000017252.1
    Conserved Domains (6) summary
    smart00349
    Location:9 → 68
    KRAB; krueppel associated box
    COG5048
    Location:315 → 722
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:182 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:9 → 47
    KRAB; KRAB box
    pfam13465
    Location:331 → 356
    zf-H2C2_2; Zinc-finger double domain

  7. XM_010852476.1 → XP_010850778.1  zinc finger protein 84 isoform X1

    See identical proteins and their annotated locations for XP_010850778.1

    UniProtKB/TrEMBL
    A0A6P3IIK2
    Conserved Domains (6) summary
    smart00349
    Location:9 → 68
    KRAB; krueppel associated box
    COG5048
    Location:315 → 722
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:182 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:9 → 47
    KRAB; KRAB box
    pfam13465
    Location:331 → 356
    zf-H2C2_2; Zinc-finger double domain

  8. XM_010852484.1 → XP_010850786.1  zinc finger protein 84 isoform X2

    UniProtKB/TrEMBL
    A0A6P3I872
    Conserved Domains (5) summary
    smart00349
    Location:1 → 32
    KRAB; krueppel associated box
    COG5048
    Location:279 → 686
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:423 → 443
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:146 → 163
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:295 → 320
    zf-H2C2_2; Zinc-finger double domain

RNA

  1. XR_826344.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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