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ODC1 ornithine decarboxylase 1 [ Bison bison bison ]

Gene ID: 104997358, updated on 12-Mar-2024

Summary

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Gene symbol
ODC1
Gene description
ornithine decarboxylase 1
See related
Ensembl:ENSBBBG00000011893
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See ODC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494879.1 (6151938..6159155, complement)

NW_011494879.1Genomic Context describing neighboring genes Neighboring gene ribonucleotide reductase regulatory subunit M2 Neighboring gene hippocalcin like 1 Neighboring gene nucleolar protein 10 Neighboring gene ATPase H+ transporting V1 subunit C2 Neighboring gene protein disulfide isomerase family A member 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494879.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ornithine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ornithine decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494879.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    6151938..6159155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010852060.1 → XP_010850362.1  ornithine decarboxylase

    See identical proteins and their annotated locations for XP_010850362.1

    UniProtKB/TrEMBL
    A0A6P3IEY4
    Conserved Domains (1) summary
    cd00622
    Location:37 → 408
    PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase

  2. XM_010852059.1 → XP_010850361.1  ornithine decarboxylase

    See identical proteins and their annotated locations for XP_010850361.1

    UniProtKB/TrEMBL
    A0A6P3IEY4
    Conserved Domains (1) summary
    cd00622
    Location:37 → 408
    PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase

  3. XM_010852061.1 → XP_010850363.1  ornithine decarboxylase

    See identical proteins and their annotated locations for XP_010850363.1

    UniProtKB/TrEMBL
    A0A6P3IEY4
    Related
    ENSBBBP00000002807.1, ENSBBBT00000011183.1
    Conserved Domains (1) summary
    cd00622
    Location:37 → 408
    PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase
Nucleotide Protein
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