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FLRT2 fibronectin leucine rich transmembrane protein 2 [ Bison bison bison ]

Gene ID: 104987111, updated on 12-Mar-2024

Summary

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Gene symbol
FLRT2
Gene description
fibronectin leucine rich transmembrane protein 2
See related
Ensembl:ENSBBBG00000023411
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See FLRT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494656.1 (2618675..2726103, complement)

NW_011494656.1Genomic Context describing neighboring genes Neighboring gene protein disulfide-isomerase A6-like Neighboring gene zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494656.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat transmembrane protein FLRT2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494656.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    2618675..2726103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010837880.1 → XP_010836182.1  leucine-rich repeat transmembrane protein FLRT2

    See identical proteins and their annotated locations for XP_010836182.1

    UniProtKB/TrEMBL
    A0A6P3HA44
    Conserved Domains (7) summary
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:14 → 150
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam12799
    Location:252 → 289
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  2. XM_010837879.1 → XP_010836181.1  leucine-rich repeat transmembrane protein FLRT2

    See identical proteins and their annotated locations for XP_010836181.1

    UniProtKB/TrEMBL
    A0A6P3HA44
    Related
    ENSBBBP00000015685.1, ENSBBBT00000026815.1
    Conserved Domains (7) summary
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:14 → 150
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam12799
    Location:252 → 289
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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