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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Bison_UMD1.0 Primary Assembly
Genomic
-
NW_011494460.1 Reference Bison_UMD1.0 Primary Assembly
- Range
-
363704..587063
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_010833760.1 → XP_010832062.1 tyrosine-protein phosphatase non-receptor type 13 isoform X1
- UniProtKB/TrEMBL
-
A0A6P3GZA2
- Conserved Domains (10) summary
-
- smart00194
Location:2248 → 2500
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1531 → 1622
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:603 → 811
- B41; Band 4.1 homologues
- smart00750
Location:31 → 219
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2274 → 2500
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:1121 → 1205
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:807 → 907
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:698 → 811
- FERM_M; FERM central domain
- pfam09379
Location:606 → 668
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1207 → 1397
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833762.1 → XP_010832064.1 tyrosine-protein phosphatase non-receptor type 13 isoform X3
- UniProtKB/TrEMBL
-
A0A6P3GYX2
- Conserved Domains (10) summary
-
- smart00194
Location:2243 → 2495
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1526 → 1617
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:603 → 811
- B41; Band 4.1 homologues
- smart00750
Location:31 → 219
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2269 → 2495
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:1121 → 1205
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:807 → 907
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:698 → 811
- FERM_M; FERM central domain
- pfam09379
Location:606 → 668
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1207 → 1397
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833764.1 → XP_010832066.1 tyrosine-protein phosphatase non-receptor type 13 isoform X5
- UniProtKB/TrEMBL
-
A0A6P3GRD2
- Conserved Domains (10) summary
-
- smart00194
Location:2199 → 2451
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1482 → 1573
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:603 → 811
- B41; Band 4.1 homologues
- smart00750
Location:31 → 219
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2225 → 2451
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:1121 → 1205
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:807 → 907
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:698 → 811
- FERM_M; FERM central domain
- pfam09379
Location:606 → 668
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1207 → 1370
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833766.1 → XP_010832068.1 tyrosine-protein phosphatase non-receptor type 13 isoform X7
- UniProtKB/TrEMBL
-
A0A6P3GKH6
- Conserved Domains (10) summary
-
- smart00194
Location:2057 → 2309
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1340 → 1431
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:603 → 811
- B41; Band 4.1 homologues
- smart00750
Location:31 → 219
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2083 → 2309
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:930 → 1014
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:807 → 907
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:698 → 811
- FERM_M; FERM central domain
- pfam09379
Location:606 → 668
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1016 → 1206
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833767.1 → XP_010832069.1 tyrosine-protein phosphatase non-receptor type 13 isoform X8
- UniProtKB/TrEMBL
-
A0A6P3GYX8
- Conserved Domains (10) summary
-
- smart00194
Location:2052 → 2304
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1335 → 1426
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:603 → 811
- B41; Band 4.1 homologues
- smart00750
Location:31 → 219
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2078 → 2304
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:930 → 1014
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:807 → 907
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:698 → 811
- FERM_M; FERM central domain
- pfam09379
Location:606 → 668
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1016 → 1206
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833765.1 → XP_010832067.1 tyrosine-protein phosphatase non-receptor type 13 isoform X6
- UniProtKB/TrEMBL
-
A0A6P3GZB0
- Conserved Domains (10) summary
-
- smart00194
Location:2059 → 2311
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1342 → 1433
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:414 → 622
- B41; Band 4.1 homologues
- smart00750
Location:31 → 219
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2085 → 2311
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:932 → 1016
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:618 → 718
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:509 → 622
- FERM_M; FERM central domain
- pfam09379
Location:417 → 479
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1018 → 1208
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833761.1 → XP_010832063.1 tyrosine-protein phosphatase non-receptor type 13 isoform X2
- UniProtKB/TrEMBL
-
A0A6P3GKH1
- Related
- ENSBBBP00000027414.1, ENSBBBT00000027125.1
- Conserved Domains (10) summary
-
- smart00194
Location:2247 → 2499
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1530 → 1621
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:602 → 810
- B41; Band 4.1 homologues
- smart00750
Location:31 → 218
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2273 → 2499
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:1120 → 1204
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:806 → 906
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:697 → 810
- FERM_M; FERM central domain
- pfam09379
Location:605 → 667
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1206 → 1396
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833763.1 → XP_010832065.1 tyrosine-protein phosphatase non-receptor type 13 isoform X4
- UniProtKB/TrEMBL
-
A0A6P3H0F6
- Related
- ENSBBBP00000027407.1, ENSBBBT00000032871.1
- Conserved Domains (10) summary
-
- smart00194
Location:2242 → 2494
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1525 → 1616
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:602 → 810
- B41; Band 4.1 homologues
- smart00750
Location:31 → 218
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2268 → 2494
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:1120 → 1204
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:806 → 906
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:697 → 810
- FERM_M; FERM central domain
- pfam09379
Location:605 → 667
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1206 → 1396
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ
-
XM_010833768.1 → XP_010832070.1 tyrosine-protein phosphatase non-receptor type 13 isoform X9
- UniProtKB/TrEMBL
-
A0A6P3H0G1
- Related
- ENSBBBP00000015848.1, ENSBBBT00000032867.1
- Conserved Domains (10) summary
-
- smart00194
Location:2051 → 2303
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00228
Location:1334 → 1425
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- smart00295
Location:602 → 810
- B41; Band 4.1 homologues
- smart00750
Location:31 → 218
- KIND; kinase non-catalytic C-lobe domain
- cd00047
Location:2077 → 2303
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00992
Location:929 → 1013
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13187
Location:806 → 906
- FERM_C_PTPH13; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor 13 (PTPH13)
- pfam00373
Location:697 → 810
- FERM_M; FERM central domain
- pfam09379
Location:605 → 667
- FERM_N; FERM N-terminal domain
- pfam16599
Location:1015 → 1205
- PTN13_u3; Unstructured linker region on PTN13 protein between PDZ